RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 HES3Q5TGS1 186 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 ZDHHC20Q5W0Z9 365 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 REXO1L1PQ8IX06 675 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 TAB3Q8N5C8 712 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 KYQ8NBH2 561 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 MAIP1Q8WWC4 291 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 PLEKHG4BQ96PX9 1271 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 OR2M4Q96R27 311 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 TBL1YQ9BQ87 522 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 IL17CQ9P0M4 197 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 VPS18Q9P253 973 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 ZNHIT2Q9UHR6 403 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 PKP3Q9Y446 797 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 KNTC1P50748 2209 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 C1QTNF9BB2RNN3 333 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 OPA1O60313 960 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 USP12O75317 370 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 IFNB1P01574 187 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 C1QTNF9P0C862 333 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 INSM1Q01101 510 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 P3H1Q32P28 736 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 PYCR3Q53H96 274 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 PDPK2PQ6A1A2 396 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 OGFOD3Q6PK18 319 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 NRROSQ86YC3 692 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 GALNT13Q8IUC8 556 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 MAPK15Q8TD08 544 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 GATA6Q92908 595 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 NAT6Q93015 286 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 RTP4Q96DX8 246 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 JRKLQ9Y4A0 524 aa17.79■□□□□ 0.44
PDLIM2-206ENST00000409141 C2orf81A6NN90 581 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 B4DGG1 531 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 STX7O15400 261 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 PSMD3O43242 534 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 AK4P27144 223 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 ACTN2P35609 894 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 TAF1AQ15573 450 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 CCNG2Q16589 344 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 LONRF2Q1L5Z9 754 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 PERM1Q5SV97 790 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 ZNF648Q5T619 568 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 SLC30A9Q6PML9 568 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 UNQ6494/PRO21346Q6UXR6 183 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 GLYATL1Q969I3 302 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 IL26Q9NPH9 171 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 SPATS2LQ9NUQ6 558 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 TRMT1Q9NXH9 659 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 TAAR2Q9P1P5 351 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 PRKAB1Q9Y478 270 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 PLEKHM1Q9Y4G2 1056 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 ARL5AQ9Y689 179 aa17.78■□□□□ 0.44
PDLIM2-206ENST00000409141 PTPRBP23467 1997 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 DNAJC6O75061 913 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 PPFIA2O75334 1257 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 MT-CO3P00414 261 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 LPOP22079 712 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 SPAM1P38567 509 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 TARDBPQ13148 414 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 PEX6Q13608 980 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 SIX1Q15475 284 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 KCTD11Q693B1 232 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 DENND5AQ6IQ26 1287 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 CHST15Q7LFX5 561 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 PHYKPLQ8IUZ5 450 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 KLHDC8BQ8IXV7 354 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 GPR156Q8NFN8 814 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 BRSK1Q8TDC3 778 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 TMEM121BQ9BXQ6 578 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 OR2AG1Q9H205 316 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 LRRC40Q9H9A6 602 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 RMI1Q9H9A7 625 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 ARNT2Q9HBZ2 717 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 TRIM39Q9HCM9 518 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 ATXN10Q9UBB4 475 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 FEZ2Q9UHY8 353 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 CLCA2Q9UQC9 943 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 ST14Q9Y5Y6 855 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 AKAP13Q12802 2813 aa17.77■□□□□ 0.44
PDLIM2-206ENST00000409141 GLYATL1P3A0A0U1RQE8 302 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 NOBOXO60393 691 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 CRTAMO95727 393 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 ACTR1BP42025 376 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 ACTR1AP61163 376 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 LRP8Q14114 963 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 PTPRCAPQ14761 206 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 ATP13A5Q4VNC0 1218 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 FAM151BQ6UXP7 276 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 SFTPA2Q8IWL1 248 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 CCDC89Q8N998 374 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 OR6C4Q8NGE1 309 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 GDAP1Q8TB36 358 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 ZDHHC1Q8WTX9 485 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 DRG1Q9Y295 367 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 ZKSCAN5Q9Y2L8 839 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 KCTD3Q9Y597 815 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms