RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 HOXC9P31274 260 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RNASE4P34096 147 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GRK3P35626 688 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGHMBP2P38935 993 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CAPGP40121 348 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ELK3P41970 407 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF41P51814 821 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ITGA8P53708 1063 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RIPPLY3P57055 190 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TFDP1Q14186 410 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CTTNQ14247 550 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DHX8Q14562 1220 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GPR19Q15760 415 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HLA-BQ31612 363 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF326Q5BKZ1 582 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 XKR7Q5GH72 579 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 WLSQ5T9L3 541 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GARNL3Q5VVW2 1013 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 INTS3Q68E01 1043 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KIAA1841Q6NSI8 718 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TAPT1Q6NXT6 567 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF880Q6PDB4 577 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PSRC1Q6PGN9 363 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RSPO2Q6UXX9 243 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZCCHC23Q6ZST2 131 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DENND5BQ6ZUT9 1274 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TOGARAM2Q6ZUX3 1019 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KANSL1Q7Z3B3 1105 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SLC46A3Q7Z3Q1 461 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF554Q86TJ5 538 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ANKMY2Q8IV38 441 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FBXO16Q8IX29 292 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CTAGE4Q8IX94 777 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OSR2Q8N2R0 312 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZCCHC9Q8N567 271 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SRFBP1Q8NEF9 429 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF519Q8TB69 540 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RORBQ92753 470 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EDC3Q96F86 508 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MAGED4Q96JG8 741 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PLEKHF1Q96S99 279 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LYSTQ99698 3801 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FOXC2Q99958 501 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ST6GALNAC5Q9BVH7 336 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CYSTM1Q9H1C7 97 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BICC1Q9H694 974 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FKRPQ9H9S5 495 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF287Q9HBT7 754 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GLOD4Q9HC38 313 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NOX4Q9NPH5 578 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 COQ3Q9NZJ6 369 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCNN3Q9UGI6 736 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CDC23Q9UJX2 597 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GJD2Q9UKL4 321 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF215Q9UL58 517 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SSX2IPQ9Y2D8 614 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EMC9Q9Y3B6 208 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SLC25A15Q9Y619 301 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NBEAQ8NFP9 2946 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NBASA2RRP1 2371 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MYO7AQ13402 2215 aa-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MDC1Q14676 2089 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ACACAQ13085 2346 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPATA31A1Q5TZJ5 1347 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGSF1Q8N6C5 1336 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3DA0A087WVF3 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3IA0A087WXS9 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3EA0A087X179 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3KA0A087X1G2 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 A0A1B0GVM2 712 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LCHNA4D1U4 455 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3BA6NDS4 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3FA6NER0 549 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3LB9A6J9 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 E7EQL1 145 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 E9PAM4 449 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EXOC5O00471 708 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EIF1AYO14602 144 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 WDR46O15213 610 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OR10H2O60403 315 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SNAP91O60641 907 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TSC22D2O75157 780 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PPM1BO75688 479 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PRKD3O94806 890 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NXPH2O95156 264 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 VENTXO95231 258 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCNH1O95259 989 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IPO7O95373 1038 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 POP4O95707 220 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CD4P01730 458 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MMP2P08253 660 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LTA4HP09960 611 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3HP0C7X1 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IL9P15248 144 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CDX1P47902 265 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NR2C2P49116 596 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SLC37A1P57057 533 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ERVK-16P61578 105 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ST8SIA6P61647 398 aa-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms