RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 EXOC3L2Q2M3D2 409 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 GOLGA7BQ2TAP0 167 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 SCGB2B2Q4G0G5 96 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 PAGE2BQ5JRK9 111 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 KCTD18Q6PI47 426 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-202ENST00000375405 KCNT2Q6UVM3 1135 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 TTLL10Q6ZVT0 673 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 DNAAF5Q86Y56 855 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF619Q8N2I2 560 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 RORBQ92753 470 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 OR2M4Q96R27 311 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 CDH20Q9HBT6 801 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 CCNB1IP1Q9NPC3 277 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 NLE1Q9NVX2 485 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-202ENST00000375405 ENOPH1Q9UHY7 261 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 GTF3C4Q9UKN8 822 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 PCDHGA2Q9Y5H1 932 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 TTC3P53804 2025 aa4.63□□□□□ -1.67
SCN1A-202ENST00000375405 VIPP01282 170 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 PCCBP05166 539 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 RNASE1P07998 156 aaKnown RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 LTA4HP09960 611 aaKnown RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 RAC2P15153 192 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 NPY1RP25929 384 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SPRP35270 261 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SPAM1P38567 509 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 WASP42768 502 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 PFKPQ01813 784 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CSHL1Q14406 222 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 C6orf141Q5SZD1 244 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 TFAP2DQ7Z6R9 452 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 Q8N9G6 341 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SLC25A36Q96CQ1 311 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 GAD1Q99259 594 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 ARPC5LQ9BPX5 153 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 OSGEPQ9NPF4 335 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 NANSQ9NR45 359 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 KIF25Q9UIL4 384 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FBXL3Q9UKT7 428 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 HBS1LQ9Y450 684 aaKnown RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 A0A1B0GV50 99 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 RPS10-NUDT3A0A1W2PQS6 291 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CASTOR2A6NHX0 329 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 A8MUA0 341 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 C1QTNF3-AMACRE9PGA6 284 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 PSMD10O75832 226 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 NUDT3O95989 172 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 PAHP00439 452 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 APOA2P02652 100 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FCER2P06734 321 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 BRCC3P46736 316 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 TAS2R60P59551 318 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SRYQ05066 204 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 RIPK1Q13546 671 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 NTRK2Q16620 822 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 C2orf27AQ580R0 203 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 IDNKQ5T6J7 187 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FAM46CQ5VWP2 391 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SLC30A10Q6XR72 485 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FAM160B2Q86V87 743 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CASTOR1Q8WTX7 329 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 C18orf8Q96DM3 657 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 ZBTB10Q96DT7 871 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 ZFP3Q96NJ6 502 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SEMA4CQ9C0C4 833 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 KANSL2Q9H9L4 492 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SLC28A3Q9HAS3 691 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SMCO4Q9NRQ5 59 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 DDIT4Q9NX09 232 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 DNAJC5BQ9UF47 199 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 UBQLN1Q9UMX0 589 aaKnown RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 SPIN1Q9Y657 262 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 A0A1B0GVC2 190 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 USP17L5A8MUK1 530 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 TFECO14948 347 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 EPHB6O15197 1021 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 PSMG1O95456 288 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 YES1P07947 543 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CSH1P0DML2 217 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CSH2P0DML3 217 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 MGST1P10620 155 aaKnown RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CCND1P24385 295 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 DDX6P26196 483 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 DGKEP52429 567 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 NDUFA9Q16795 377 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 GPR157Q5UAW9 335 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 DCLRE1AQ6PJP8 1040 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 USP45Q70EL2 814 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 NLGN4YQ8NFZ3 816 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 PIH1D2Q8WWB5 315 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF669Q96BR6 464 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FEM1CQ96JP0 617 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FCRL3Q96P31 734 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-202ENST00000375405 FNDC11Q9BVV2 318 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 DNTTIP1Q9H147 329 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 TBC1D17Q9HA65 648 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 C19orf12Q9NSK7 152 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 CENPMQ9NSP4 180 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 EMILIN3Q9NT22 766 aa4.62□□□□□ -1.67
SCN1A-202ENST00000375405 GDAP2Q9NXN4 497 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms