RNA–Protein interactions for RNA: ENST00000357898.3

SPSB1-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPSB1, Length 1,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-202ENST00000357898 VPS18Q9P253 973 aa16.56■□□□□ 0.24
SPSB1-202ENST00000357898 SHOC2Q9UQ13 582 aa16.56■□□□□ 0.24
SPSB1-202ENST00000357898 PRKAB1Q9Y478 270 aa16.56■□□□□ 0.24
SPSB1-202ENST00000357898 PCDHGA7Q9Y5G6 932 aa16.56■□□□□ 0.24
SPSB1-202ENST00000357898 ST14Q9Y5Y6 855 aa16.56■□□□□ 0.24
SPSB1-202ENST00000357898 ARHGEF17Q96PE2 2063 aaPredicted RBP16.56■□□□□ 0.24
SPSB1-202ENST00000357898 IGSF10Q6WRI0 2623 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 A0A0A6YYK5 440 aaPredicted RBP16.55■□□□□ 0.24
SPSB1-202ENST00000357898 TK2O00142 265 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 PSTPIP1O43586 416 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 CST8O60676 142 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 ITIH1P19827 911 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 CDK18Q07002 472 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 TCEAL1Q15170 157 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 CLPPQ16740 277 aaPredicted RBP16.55■□□□□ 0.24
SPSB1-202ENST00000357898 TEX44Q53QW1 395 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 HENMT1Q5T8I9 393 aaKnown RBP16.55■□□□□ 0.24
SPSB1-202ENST00000357898 TMEM164Q5U3C3 297 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 ALS2CLQ60I27 953 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 ZNF438Q7Z4V0 828 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 CCDC50Q8IVM0 306 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 OLFM3Q96PB7 478 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 SLC38A3Q99624 504 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 STN1Q9H668 368 aaKnown RBP16.55■□□□□ 0.24
SPSB1-202ENST00000357898 RMI1Q9H9A7 625 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 GLOD4Q9HC38 313 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 RAD18Q9NS91 495 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 KCNK4Q9NYG8 393 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.55■□□□□ 0.24
SPSB1-202ENST00000357898 ALG6Q9Y672 507 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 SMG1Q96Q15 3661 aaKnown RBP16.55■□□□□ 0.24
SPSB1-202ENST00000357898 BPTFQ12830 3046 aa16.55■□□□□ 0.24
SPSB1-202ENST00000357898 FADS2P1A8MWK0 482 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 PPM1DO15297 605 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 NVLO15381 856 aaKnown RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 SNX2O60749 519 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 PMPCBO75439 489 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 SLC25A14O95258 325 aaPredicted RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 PIRTP0C851 137 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 CDKN2BP42772 138 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 RHDQ02161 417 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 C19orf57Q0VDD7 668 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 CLN3Q13286 438 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 ZNF569Q5MCW4 686 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 NKAIN2Q5VXU1 208 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 TMPRSS9Q7Z410 1059 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 SLITRK4Q8IW52 837 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 LSM14AQ8ND56 463 aaKnown RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 SPATA22Q8NHS9 363 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 P3H4Q92791 437 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 WDR24Q96S15 920 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 SRPK1Q96SB4 655 aaKnown RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 NUDT22Q9BRQ3 303 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 MAGEE1Q9HCI5 957 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 SAE1Q9UBE0 346 aaPredicted RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 CNOT6Q9ULM6 557 aaKnown RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 PCDHB11Q9Y5F2 797 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 PCDHA13Q9Y5I0 950 aa16.54■□□□□ 0.24
SPSB1-202ENST00000357898 OAS3Q9Y6K5 1087 aaKnown RBP16.54■□□□□ 0.24
SPSB1-202ENST00000357898 ERVH48-1M5A8F1 160 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 DNAJC6O75061 913 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 ZRANB2O95218 330 aaKnown RBP eCLIP16.53■□□□□ 0.24
SPSB1-202ENST00000357898 MT-CYBP00156 380 aaPredicted RBP16.53■□□□□ 0.24
SPSB1-202ENST00000357898 ACP5P13686 325 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 CD1CP29017 333 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 CYLC1P35663 651 aaPredicted RBP16.53■□□□□ 0.24
SPSB1-202ENST00000357898 NR1D2Q14995 579 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 SARM1Q6SZW1 724 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 SPOCD1Q6ZMY3 1216 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 RCOR2Q8IZ40 523 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 TC2NQ8N9U0 490 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 RCBTB1Q8NDN9 531 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 USP7Q93009 1102 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 CCNL2Q96S94 520 aaPredicted RBP16.53■□□□□ 0.24
SPSB1-202ENST00000357898 DPYSL5Q9BPU6 564 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 ZSCAN5AQ9BUG6 496 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 UBP1Q9NZI7 540 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 KCNK6Q9Y257 313 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 ZNF711Q9Y462 761 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 ATRXP46100 2492 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 PRAMEF33A0A0G2JMD5 474 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 MTSS1O43312 755 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 GRID2O43424 1007 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 PRAMEF10O60809 474 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 NDST3O95803 873 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 PRB1P04280 392 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 SLC2A4P14672 509 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 PTPN3P26045 913 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 NAP1L1P55209 391 aaKnown RBP16.53■□□□□ 0.24
SPSB1-202ENST00000357898 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 ZC3H18Q86VM9 953 aaKnown RBP16.53■□□□□ 0.24
SPSB1-202ENST00000357898 PHYKPLQ8IUZ5 450 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 OR10G6Q8NH81 332 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 SLC37A2Q8TED4 501 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 CCDC74BQ96LY2 380 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 TEKT5Q96M29 485 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 TRIB3Q96RU7 358 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 OR2AG1Q9H205 316 aa16.53■□□□□ 0.24
SPSB1-202ENST00000357898 CARD9Q9H257 536 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms