RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 CybbQ61093 570 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Znf821Q6PD05 413 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Far2Q7TNT2 515 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ipo13Q8K0C1 963 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Slc47a1Q8K0H1 567 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 GrpQ8R1I2 146 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Vmp1Q99KU0 406 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ggps1Q9WTN0 300 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr1121L7MTT1 314 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Vars2Q3U2A8 1060 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hist2h2acQ64523 129 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 SvoplQ6PDF3 494 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Msl1Q6PDM1 616 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 SgczQ8BX51 311 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Il22Q9JJY9 179 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Wnt8bQ9WUD6 350 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ttc3O88196 1979 aaKnown RBP16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 C2P21180 760 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dact3Q0PHV7 610 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zfp560Q3URI6 754 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Adora2aQ60613 410 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Il1rapQ61730 570 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Wscd1Q80XH4 572 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Klhl42Q8BFQ9 493 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gm6377Q8BHV4 303 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ndufb5Q9CQH3 189 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Plpp6Q9D4F2 292 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tor1bQ9ER41 336 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Asb4Q9WV71 426 aa16.81■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Akap5D3YVF0 745 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Neurog2P70447 263 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pnpla5Q32LZ8 432 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Plk5Q4FZD7 595 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Prss36Q5K2P8 849 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gstt1Q64471 240 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Map3k10Q66L42 940 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Casc4Q6P2L7 435 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ces2bQ6PDB7 556 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 PoliQ6R3M4 717 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ssxb3Q6XAS4 170 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gpr171Q8BG55 319 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dapk2Q8VDF3 370 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tmeff2Q9QYM9 374 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Nfx1B1AY10 1114 aaKnown RBP16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Vmn2r38G3UYA8 861 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Vmn2r33K7N705 861 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 NapsaO09043 419 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hoxd4P10628 250 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Vps51Q3UVL4 782 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Mylk4Q5SUV5 386 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Arnt2Q61324 712 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Thoc7Q7TMY4 204 aaKnown RBP16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ppp1r1cQ8BKK4 108 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Plekhn1Q8C886 359 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Unc45aQ99KD5 944 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 BC024063A0A1W2P7G7 749 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr1049A2ARZ0 308 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 2210016F16RikG3X8U3 338 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hcn1O88704 910 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cd72P21855 354 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Clcn3P51791 818 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Mc1rQ01727 315 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Iars2Q8BIJ6 1012 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ppp4r4Q8C0Y0 875 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Piwil2Q8CDG1 971 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pcdhb2Q91Y00 799 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pmf1Q9CPV5 202 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Metap1dQ9CPW9 335 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hm13Q9D8V0 378 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hipk3Q9ERH7 1192 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Col24a1Q30D77 1733 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Plxnb3Q9QY40 1902 aa16.8■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Scn8aQ9WTU3 1978 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Umodl1Q5DID3 1319 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Itgb3O54890 787 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Eno3P21550 434 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pou2f2Q00196 463 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zc3h15Q3TIV5 426 aaKnown RBP16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Colgalt2Q6NVG7 625 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Clec2eQ80XD9 204 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zdhhc15Q8BGJ0 337 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 TxlngQ8BHN1 524 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Wnt9aQ8R5M2 365 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Trim33Q99PP7 1142 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 MispQ9D279 648 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tor1aQ9ER39 333 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cpne6Q9Z140 557 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Bnc1O35914 961 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hspa8P63017 646 aaKnown RBP16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 StacP97306 403 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Emx1Q04742 257 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Kiaa1841Q68FF0 718 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 HomezQ80W88 542 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fbxo44Q8BK26 255 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Vmn1r201Q8R262 300 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Foxe1Q8R2I0 371 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr1361Q8VFH0 317 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 C1qtnf3Q9ES30 246 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Plxna3P70208 1872 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 A930018M24RikB7ZMY3 218 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms