RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ABHD11Q8NFV4 315 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 PPTC7Q8NI37 304 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 DNAJB14Q8TBM8 379 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 BPIFB1Q8TDL5 484 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 HDAC2Q92769 488 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 MRGPRX2Q96LB1 330 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 SOX17Q9H6I2 414 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 ARNT2Q9HBZ2 717 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 PCDHGA11Q9Y5H2 935 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 KRBA1A5PL33 1030 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 SLC7A4O43246 635 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 MAFKO60675 156 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 EEDO75530 441 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 HPRP00739 348 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 THRBP10828 461 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 CHRM3P20309 590 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 ELK4P28324 431 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 CDH13P55290 713 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 GABARAPL2P60520 117 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 RCAN2Q14206 197 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 FXNQ16595 210 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 RAB41Q5JT25 222 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 CILP2Q8IUL8 1156 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 C8orf59Q8N0T1 100 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 PTGR2Q8N8N7 351 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 PDZD8Q8NEN9 1154 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 S100ZQ8WXG8 99 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 RNF34Q969K3 372 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 BIRC7Q96CA5 298 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 SLX1AQ9BQ83 275 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 SPON1Q9HCB6 807 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 LEF1Q9UJU2 399 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 DSEQ9UL01 958 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 GPR45Q9Y5Y3 372 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 CNMDO75829 334 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 CDH1P12830 882 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 CRHBPP24387 322 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 AKAP5P24588 427 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 CHRNA4P43681 627 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 IREB2P48200 963 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 KCNC1P48547 511 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 MAPK10P53779 464 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 GRIK4Q16099 956 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 TMEM53Q6P2H8 277 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 ARHGAP36Q6ZRI8 547 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 ARHGAP12Q8IWW6 846 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 AURKBQ96GD4 344 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 SH3YL1Q96HL8 342 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 ZNF641Q96N77 438 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 CORO1BQ9BR76 489 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 RBM22Q9NW64 420 aaKnown RBP eCLIP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 TMEM45AQ9NWC5 275 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 POLG2Q9UHN1 485 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 MAGEL2Q9UJ55 1249 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 NUP205Q92621 2012 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 H3BRB1 525 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 GABRDO14764 452 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 FGF10O15520 208 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 USP17L7P0C7H9 530 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 NCK1P16333 377 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 PLA2G16P53816 162 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 TOP3AQ13472 1001 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 XKR4Q5GH76 650 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 RABL3Q5HYI8 236 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 OTUD3Q5T2D3 398 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 FKBP9P1Q75LS8 142 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 SPARTQ8N0X7 666 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 NSMCE2Q96MF7 247 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 RNF145Q96MT1 663 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 SEPHS2Q99611 448 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 BCL7BQ9BQE9 202 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 PSD2Q9BQI7 771 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 C16orf70Q9BSU1 422 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 ADNPQ9H2P0 1102 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 TUT1Q9H6E5 874 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 CATSPERBQ9H7T0 1116 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 RNF19AQ9NV58 838 aa14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 WARS2Q9UGM6 360 aaKnown RBP14.75□□□□□ -0.05
CACNA1A-220ENST00000635988 PRSS23O95084 383 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 EIF2S1P05198 315 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 HLA-DQB2P05538 268 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 ZNF286BP0CG31 522 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 SERPINH1P50454 418 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 WNT3AP56704 352 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 TRIM32Q13049 653 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 BCL2A1Q16548 175 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 TBPL2Q6SJ96 375 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 PRR23BQ6ZRT6 265 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 EFL1Q7Z2Z2 1120 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 LRRC49Q8IUZ0 686 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 RIMKLAQ8IXN7 391 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 CLEC4FQ8N1N0 589 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 PARP8Q8N3A8 854 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 RHEBL1Q8TAI7 183 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 ALPK1Q96QP1 1244 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 CSF3RQ99062 836 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 R3HDMLQ9H3Y0 253 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 SCHIP1Q9P0W5 487 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 GINS2Q9Y248 185 aa14.74□□□□□ -0.05
CACNA1A-220ENST00000635988 CCDC154A6NI56 674 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms