RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 BEST2Q8NFU1 509 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 EFHD2Q96C19 240 aaPredicted RBP15.6■□□□□ 0.09
SYNRG-223ENST00000616179 TSEN34Q9BSV6 310 aaKnown RBP15.6■□□□□ 0.09
SYNRG-223ENST00000616179 TOR4AQ9NXH8 423 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 TCRBV5S1A1TA0A578 114 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 A8MT66 165 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 MSI1O43347 362 aaKnown RBP15.6■□□□□ 0.09
SYNRG-223ENST00000616179 NPR1P16066 1061 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 DDX5P17844 614 aaKnown RBP15.6■□□□□ 0.09
SYNRG-223ENST00000616179 KRT6CP48668 564 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 DIO3P55073 304 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 C6orf141Q5SZD1 244 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 RBM20Q5T481 1227 aaKnown RBP15.6■□□□□ 0.09
SYNRG-223ENST00000616179 DESI1Q6ICB0 168 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 B3GNT9Q6UX72 402 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 GCNT7Q6ZNI0 430 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 ROPN1LQ96C74 230 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 CHCHD6Q9BRQ6 235 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 DCSTAMPQ9H295 470 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 PRDM16Q9HAZ2 1276 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 KLK14Q9P0G3 267 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 SYNPO2Q9UMS6 1093 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 FAM50BQ9Y247 325 aa15.6■□□□□ 0.09
SYNRG-223ENST00000616179 BCKDKO14874 412 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 HCRTO43612 131 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 SLC35E2BP0CK96 405 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 BMP4P12644 408 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 ITGB6P18564 788 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 HTR1BP28222 390 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 RFC2P35250 354 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 GGT5P36269 586 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 NR6A1Q15406 480 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 PRAMEF18Q5VWM3 479 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 OR13F1Q8NGS4 319 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 KCNS3Q9BQ31 491 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 MRPL45Q9BRJ2 306 aaKnown RBP15.59■□□□□ 0.09
SYNRG-223ENST00000616179 SLC2A6Q9UGQ3 507 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 ADGRE2Q9UHX3 823 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 MDM4O15151 490 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 MAFGO15525 162 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 PTPN3P26045 913 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 KCNAB2Q13303 367 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 KRR1Q13601 381 aaKnown RBP15.59■□□□□ 0.09
SYNRG-223ENST00000616179 GRB7Q14451 532 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 VPS72Q15906 364 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CYBRD1Q53TN4 286 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CYP4V2Q6ZWL3 525 aaPredicted RBP15.59■□□□□ 0.09
SYNRG-223ENST00000616179 EFL1Q7Z2Z2 1120 aaKnown RBP15.59■□□□□ 0.09
SYNRG-223ENST00000616179 EPHX4Q8IUS5 362 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 MINDY2Q8NBR6 621 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 UGT2B28Q9BY64 529 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CDT1Q9H211 546 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CYP3A43Q9HB55 503 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 SNTG2Q9NY99 539 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 ERVK-18Q9QC07 812 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 KLHL3Q9UH77 587 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 PLSCR1O15162 318 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 AIREO43918 545 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 ANXA6P08133 673 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CHRNB1P11230 501 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 RACK1P63244 317 aaKnown RBP15.59■□□□□ 0.09
SYNRG-223ENST00000616179 ATP6AP1Q15904 470 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 SOWAHAQ2M3V2 549 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 ARMCX4Q5H9R4 360 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 FEM1CQ96JP0 617 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 TUBA1CQ9BQE3 449 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 RGS18Q9NS28 235 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CD274Q9NZQ7 290 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 CDH7Q9ULB5 785 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 SPO11Q9Y5K1 396 aa15.59■□□□□ 0.09
SYNRG-223ENST00000616179 DYRK3O43781 588 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 ALDH1A2O94788 518 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 HOXC6P09630 235 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 YBX3P16989 372 aaKnown RBP eCLIP15.58■□□□□ 0.09
SYNRG-223ENST00000616179 MLLT10P55197 1068 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 CD83Q01151 205 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 CNTN2Q02246 1040 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 USP41Q3LFD5 358 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 BLOC1S5Q8TDH9 187 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 STON2Q8WXE9 905 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 SEPT1Q8WYJ6 367 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 AGPAT4Q9NRZ5 378 aa15.58■□□□□ 0.09
SYNRG-223ENST00000616179 SLC22A1O15245 554 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 IDH2P48735 452 aaKnown RBP15.58■□□□□ 0.08
SYNRG-223ENST00000616179 APLP1P51693 650 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 ATP6V0D1P61421 351 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 RETREG3Q86VR2 466 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 RPL3LQ92901 407 aaKnown RBP15.58■□□□□ 0.08
SYNRG-223ENST00000616179 RBM22Q9NW64 420 aaKnown RBP eCLIP15.58■□□□□ 0.08
SYNRG-223ENST00000616179 CMTM6Q9NX76 183 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 LEF1Q9UJU2 399 aaPredicted RBP15.58■□□□□ 0.08
SYNRG-223ENST00000616179 CCDC162PA2VCL2 907 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 NPHS1O60500 1241 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 EDN1P05305 212 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 SLC1A2P43004 574 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 ALDH7A1P49419 539 aaKnown RBP15.58■□□□□ 0.08
SYNRG-223ENST00000616179 TUBA3CQ13748 450 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 PCID2Q5JVF3 399 aa15.58■□□□□ 0.08
SYNRG-223ENST00000616179 CDH24Q86UP0 819 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms