RNA–Protein interactions for RNA: ENST00000560506.5

TCF12-217, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-217	ENST00000560506	VDAC3	Q9Y277	283 aa		4.18	□□□□□ -1.74
TCF12-217	ENST00000560506	DICER1	Q9UPY3	1922 aa	Known RBP	4.18	□□□□□ -1.74
TCF12-217	ENST00000560506	C4A	P0C0L4	1744 aa		4.18	□□□□□ -1.74
TCF12-217	ENST00000560506	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	USP47	Q96K76	1375 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506		A0A0U1RQF3	1178 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	LMX1B	O60663	402 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	GAS8-AS1	O95177	125 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	PLG	P00747	810 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	CD58	P19256	250 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	CHAT	P28329	748 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	STX2	P32856	288 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	NLRP5	P59047	1200 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	TROAP	Q12815	778 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	VEPH1	Q14D04	833 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	PKN2	Q16513	984 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	AMZ1	Q400G9	498 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	C9orf139	Q6ZV77	190 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	SFR1	Q86XK3	245 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	MAB21L3	Q8N8X9	362 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	TNIP2	Q8NFZ5	429 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	SIN3A	Q96ST3	1273 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	EYA3	Q99504	573 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	NUF2	Q9BZD4	464 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	UBTD1	Q9HAC8	227 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	PTPRH	Q9HD43	1115 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	NOX4	Q9NPH5	578 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	SMYD2	Q9NRG4	433 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	CISD1	Q9NZ45	108 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	ZNF224	Q9NZL3	707 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	PEMT	Q9UBM1	199 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	SIX4	Q9UIU6	781 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	CARD8	Q9Y2G2	431 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	A3GALT2	U3KPV4	340 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	RGPD5	Q99666	1765 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	PAPPA2	Q9BXP8	1791 aa		4.17	□□□□□ -1.74
TCF12-217	ENST00000560506	MUC6	Q6W4X9	2439 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	NSD2	O96028	1365 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	ANKRD36B	Q8N2N9	1353 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	CACNA1B	Q00975	2339 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	TCEA1	P23193	301 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	GPD2	P43304	727 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	CHRND	Q07001	517 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	TAF11	Q15544	211 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	OASL	Q15646	514 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	GRAMD1B	Q3KR37	738 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	ATP13A5	Q4VNC0	1218 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	WDR45B	Q5MNZ6	344 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	SERTAD4-AS1	Q5TG53	156 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	STPG1	Q5TH74	334 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	FAM122C	Q6P4D5	195 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	GDPD4	Q6W3E5	623 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	TADA2B	Q86TJ2	420 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	GPAT4	Q86UL3	456 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	NKAP	Q8N5F7	415 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	KCNH5	Q8NCM2	988 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	RUFY2	Q8WXA3	655 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	TANK	Q92844	425 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	SNAPC3	Q92966	411 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	ZNF570	Q96NI8	536 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	ARPC5L	Q9BPX5	153 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	MXRA8	Q9BRK3	442 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	SAGE1	Q9NXZ1	904 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	NFE2L3	Q9Y4A8	694 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	AKAP11	Q9UKA4	1901 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	CHD8	Q9HCK8	2581 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	SCN11A	Q9UI33	1791 aa		4.16	□□□□□ -1.74
TCF12-217	ENST00000560506	NCOR1	O75376	2440 aa		4.15	□□□□□ -1.74
TCF12-217	ENST00000560506		A0A0G2JPF8	293 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	HNRNPCL3	B7ZW38	293 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	HNRNPCL1	O60812	293 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	SP1	P08047	785 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	LINC00271	P0C7V0	271 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	HNRNPCL4	P0DMR1	293 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	SRC	P12931	536 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	POU1F1	P28069	291 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	HNRNPH1	P31943	449 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	CLDN2	P57739	230 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	ARL16	Q0P5N6	197 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	ZNF155	Q12901	538 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	MAP3K21	Q5TCX8	1036 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	ATG16L1	Q676U5	607 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	TMPRSS12	Q86WS5	348 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	DEFB123	Q8N688	67 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	SCCPDH	Q8NBX0	429 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	LSM14A	Q8ND56	463 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	FIG4	Q92562	907 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	KXD1	Q9BQD3	176 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	ISCA1	Q9BUE6	129 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	EBF2	Q9HAK2	575 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	SDF2L1	Q9HCN8	221 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	SNTG1	Q9NSN8	517 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	CTNNAL1	Q9UBT7	734 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	HTT	P42858	3142 aa		4.15	□□□□□ -1.75
TCF12-217	ENST00000560506	EYS	Q5T1H1	3165 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms