RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PCIF1Q9H4Z3 704 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 BCAS3Q9H6U6 928 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 GPRC5CQ9NQ84 441 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 XPNPEP3Q9NQH7 507 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 TRMT13Q9NUP7 481 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 ASNSD1Q9NWL6 643 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 CPNE7Q9UBL6 633 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 ADGRE2Q9UHX3 823 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 KLHL21Q9UJP4 597 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 MAPRE3Q9UPY8 281 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 TMEM5Q9Y2B1 443 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 MRPS7Q9Y2R9 242 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 COQ4Q9Y3A0 265 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 MYH9P35579 1960 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 FER1L6Q2WGJ9 1857 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 ATP6AP2A0A1C7CYW4 349 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 GRID2O43424 1007 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 NRP2O60462 931 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 WDPCPO95876 746 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 FTH1P02794 183 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 PRKCGP05129 697 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 RPS17P08708 135 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 TCF4P15884 667 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 TPMTP51580 245 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 ARSFP54793 590 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 GCNT1Q02742 428 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 SPIRE1Q08AE8 756 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 EFR3AQ14156 821 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 NFIXQ14938 502 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 CYP51A1Q16850 503 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 BTBD16Q32M84 506 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 C1orf220Q5T0J3 134 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 ARMC4Q5T2S8 1044 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 SYT6Q5T7P8 510 aaPredicted RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 NAPRTQ6XQN6 538 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 BEND5Q7L4P6 421 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 SLC22A15Q8IZD6 547 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 CLEC4FQ8N1N0 589 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 FBXL13Q8NEE6 735 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM110BQ8TC76 370 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 DHX38Q92620 1227 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 HOPXQ9BPY8 73 aaPredicted RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 GGA3Q9NZ52 723 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 GMPR2Q9P2T1 348 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 NUDT5Q9UKK9 219 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 ZNF330Q9Y3S2 320 aaPredicted RBP8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 SNX8Q9Y5X2 465 aa8.51□□□□□ -1.05
SRGAP1-202ENST00000537556 CCDC182A6NF36 153 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 CLDN24A6NM45 220 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 C2orf81A6NN90 581 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 C1QBP02746 253 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 RAB3AP20336 220 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 HMGCLP35914 325 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 CD83Q01151 205 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 UBE3AQ05086 875 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 FPGSQ05932 587 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 DAG1Q14118 895 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 FASTKQ14296 549 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 ANGPT1Q15389 498 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 OTUD3Q5T2D3 398 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 KIAA1324Q6UXG2 1013 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TNS4Q8IZW8 715 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 LRRC71Q8N4P6 559 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 CHCHD4Q8N4Q1 142 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 MCUQ8NE86 351 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 OR4M1Q8NGD0 313 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 ENKURQ8TC29 256 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SPATA18Q8TC71 538 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TRPM4Q8TD43 1214 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 RPL3LQ92901 407 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 NXPE3Q969Y0 559 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TEKT5Q96M29 485 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 GATA5Q9BWX5 397 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 MUC13Q9H3R2 512 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TOR3AQ9H497 397 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PLAC1Q9HBJ0 212 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 CHRAC1Q9NRG0 131 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 ING3Q9NXR8 418 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 DPP3Q9NY33 737 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PGAP2Q9UHJ9 254 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 NUFIP1Q9UHK0 495 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TRMT112Q9UI30 125 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 GGA1Q9UJY5 639 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 KLHL20Q9Y2M5 609 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 MTF2Q9Y483 593 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 KLF2Q9Y5W3 355 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PRR23AA6NEV1 266 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SLC1A7O00341 560 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TRIM3O75382 744 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SLC22A5O76082 557 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PIGNO95427 931 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 APOA4P06727 396 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 HSD17B1P14061 328 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PCSK2P16519 638 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 ACVR2AP27037 513 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PSMB9P28065 219 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 DSG3P32926 999 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms