RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TIMM22Q9Y584 194 aa7.41□□□□□ -1.22
CLIP1-205ENST00000514271 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 GOLGA8SH3BPF8 625 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 GOLGA8MH3BSY2 632 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 PAPSS1O43252 624 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 PIP5K1CO60331 668 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 NPHS1O60500 1241 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 KRT37O76014 449 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 LTFP02788 710 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SLC35E2BP0CK96 405 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 MATN1P21941 496 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 IDUAP35475 653 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 CASP2P42575 452 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 BRCC3P46736 316 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 NR2C2P49116 596 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 EIF3EP60228 445 aaKnown RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 PRKCQQ04759 706 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 TUBA3CQ13748 450 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 MAP7Q14244 749 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 RAB39AQ14964 217 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 LLGL1Q15334 1064 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SOWAHAQ2M3V2 549 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 TCHHL1Q5QJ38 904 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 BEND5Q7L4P6 421 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 VN1R5Q7Z5H4 357 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 NUDCD3Q8IVD9 361 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 CENPSQ8N2Z9 138 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 LILRB2Q8N423 598 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SLC35F5Q8WV83 523 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 BORCS5Q969J3 196 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 MYRFLQ96LU7 910 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 FAM126AQ9BYI3 521 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 GBA3Q9H227 469 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 CDC14AQ9UNH5 594 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 HTTP42858 3142 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ARHGAP10A1A4S6 786 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 EPOPA6NHQ4 379 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 M0QX08 132 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SGK1O00141 431 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 TRIM38O00635 465 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SGTAO43765 313 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 GPX3P22352 226 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SERPINB5P36952 375 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ETV6P41212 452 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ACADSBP45954 432 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 LEPRP48357 1165 aaKnown RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 HLCSP50747 726 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 IRX4P78413 519 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 COX10Q12887 443 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 NFATC3Q12968 1075 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 BMPR2Q13873 1038 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 CCDC6Q16204 474 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ATAT1Q5SQI0 421 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 LCLAT1Q6UWP7 414 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 PRSS48Q7RTY5 328 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 GPR155Q7Z3F1 870 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 TMCO2Q7Z6W1 182 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 LACC1Q8IV20 430 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 PSTKQ8IV42 348 aaKnown RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ADGRG5Q8IZF4 528 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ATP6V0D2Q8N8Y2 350 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 SUSD6Q92537 303 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 TTLL2Q9BWV7 592 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 MRPL1Q9BYD6 325 aaKnown RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 FBXO44Q9H4M3 255 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 CD320Q9NPF0 282 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 TMEM45AQ9NWC5 275 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 ZDHHC2Q9UIJ5 367 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 APOBEC2Q9Y235 224 aaKnown RBP7.4□□□□□ -1.22
CLIP1-205ENST00000514271 RAP2CQ9Y3L5 183 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 CPQQ9Y646 472 aa7.4□□□□□ -1.22
CLIP1-205ENST00000514271 K7EPI3 171 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 DCLK1O15075 740 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 SEMG1P04279 462 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 PGAM1P18669 254 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 IGFBP4P22692 258 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 RBL1P28749 1068 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 GMPRP36959 345 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 NRIP1P48552 1158 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 TRIP10Q15642 601 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 ARHGAP15Q53QZ3 475 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 WSCD1Q658N2 575 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM270Q6UE05 265 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 MTSS1LQ765P7 747 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 B3GALNT2Q8NCR0 500 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 PDLIM5Q96HC4 596 aaKnown RBP7.4□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM176AQ96HP8 235 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 ELMO2Q96JJ3 720 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 LIN28AQ9H9Z2 209 aaKnown RBP7.4□□□□□ -1.23
CLIP1-205ENST00000514271 CLK4Q9HAZ1 481 aaKnown RBP7.4□□□□□ -1.23
CLIP1-205ENST00000514271 GOLGA2P5Q9HBQ8 144 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 CSNK1G1Q9HCP0 422 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 PAK1IP1Q9NWT1 392 aaPredicted RBP7.4□□□□□ -1.23
CLIP1-205ENST00000514271 SCHIP1Q9P0W5 487 aaPredicted RBP7.4□□□□□ -1.23
CLIP1-205ENST00000514271 KLHL3Q9UH77 587 aa7.4□□□□□ -1.23
CLIP1-205ENST00000514271 A0A0B4J203 849 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MTMR11A4FU01 709 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 HACD1B0YJ81 288 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TSPAN6O43657 245 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms