RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TRIM25Q14258 630 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 KIF19Q2TAC6 998 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 UGT3A2Q3SY77 523 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 KANK2Q63ZY3 851 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 ANKS6Q68DC2 871 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 C16orf59Q7L2K0 433 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PCDH20Q8N6Y1 951 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PCYOX1LQ8NBM8 494 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 RIN3Q8TB24 985 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 HMGCLL1Q8TB92 370 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PIP4K2CQ8TBX8 421 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 TWIST2Q8WVJ9 160 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SCLYQ96I15 445 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 CLSTN3Q9BQT9 956 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PCDHGC4Q9Y5F7 938 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 H0Y626 953 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 ACOT8O14734 319 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 MRASO14807 208 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 VPS4BO75351 444 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CRCPO75575 148 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 TMCC1O94876 653 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 ABLIM3O94929 683 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 UPP2O95045 317 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 STAMBPO95630 424 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 LATS1O95835 1130 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 MT-CO1P00395 513 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CXCL10P02778 98 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 F11P03951 625 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 PKMP14618 531 aaKnown RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 VCLP18206 1134 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 TCN1P20061 433 aaPredicted RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CD9P21926 228 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 EEF1DP29692 281 aaKnown RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 MSX2P35548 267 aaPredicted RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CLCN4P51793 760 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 PRMT2P55345 433 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 IRX1P78414 480 aaPredicted RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 ARF5P84085 180 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CLCQ05315 142 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 PLD1Q13393 1074 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 PTPRNQ16849 979 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 INO80DQ53TQ3 878 aaPredicted RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 OR52E8Q6IFG1 317 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CXorf57Q6NSI4 855 aaKnown RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 TXNDC11Q6PKC3 985 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 HACD2Q6Y1H2 254 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 SPATA24Q86W54 205 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 TRPC4APQ8TEL6 797 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 ROPN1LQ96C74 230 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 NSMCE3Q96MG7 304 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 GPR21Q99679 349 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 RNF38Q9H0F5 515 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 Q9H521 79 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 TRMT6Q9UJA5 497 aaKnown RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 CROTQ9UKG9 612 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 TMCO1Q9UM00 188 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 YIPF1Q9Y548 306 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 COMMD10Q9Y6G5 202 aa11.02□□□□□ -0.64
CMSS1-208ENST00000496116 OAS3Q9Y6K5 1087 aaKnown RBP11.02□□□□□ -0.64
CMSS1-208ENST00000496116 SCN5AQ14524 2016 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 E7ENX8 843 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 H7C0S8 307 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 FBP2O00757 339 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 STX16O14662 325 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 PIP5K1BO14986 540 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 SOD2P04179 222 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 MBL2P11226 248 aaPredicted RBP11.02□□□□□ -0.65
CMSS1-208ENST00000496116 CCL23P55773 120 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 TWF1Q12792 350 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
CMSS1-208ENST00000496116 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 ZRANB3Q5FWF4 1079 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 SAMD4BQ5PRF9 694 aaKnown RBP11.02□□□□□ -0.65
CMSS1-208ENST00000496116 CYHR1Q6ZMK1 362 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 DDIASQ8IXT1 998 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 EFHBQ8N7U6 833 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 ADCY4Q8NFM4 1077 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 C3orf30Q96M34 536 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 HIPK3Q9H422 1215 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.65
CMSS1-208ENST00000496116 FKBPLQ9UIM3 349 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 STOML2Q9UJZ1 356 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 MED16Q9Y2X0 877 aa11.02□□□□□ -0.65
CMSS1-208ENST00000496116 C2orf78A6NCI8 922 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 E5RI56 91 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 GIPC1O14908 333 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 TBL1XO60907 577 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 ECI2O75521 394 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 ZCCHC18P0CG32 403 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 ARSAP15289 507 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 TSNQ15631 228 aaKnown RBP11.01□□□□□ -0.65
CMSS1-208ENST00000496116 MAP7D1Q3KQU3 841 aa11.01□□□□□ -0.65
CMSS1-208ENST00000496116 SETMARQ53H47 684 aaPredicted RBP11.01□□□□□ -0.65
CMSS1-208ENST00000496116 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
CMSS1-208ENST00000496116 PSAPL1Q6NUJ1 521 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms