RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 ATP5OP48047 213 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 WNT3AP56704 352 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 HENMT1Q5T8I9 393 aaKnown RBP21.05■□□□□ 0.96
LIME1-204ENST00000476183 CCDC181Q5TID7 509 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 OGFOD3Q6PK18 319 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 PID1Q7Z2X4 250 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 PEX26Q7Z412 305 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 FAM46DQ8NEK8 389 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 GPR156Q8NFN8 814 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 CCHCR1Q8TD31 782 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 GPBAR1Q8TDU6 330 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 NAT6Q93015 286 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 SCARF2Q96GP6 870 aaPredicted RBP21.05■□□□□ 0.96
LIME1-204ENST00000476183 OXNAD1Q96HP4 312 aaPredicted RBP21.05■□□□□ 0.96
LIME1-204ENST00000476183 HIC2Q96JB3 615 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 FCRL5Q96RD9 977 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 VAT1Q99536 393 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 FAM118BQ9BPY3 351 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 FAM83DQ9H4H8 585 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 ZFYVE1Q9HBF4 777 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 MAGEE1Q9HCI5 957 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 PKD2L2Q9NZM6 624 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 DKK4Q9UBT3 224 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 FAM153AQ9UHL3 310 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 RABGEF1Q9UJ41 708 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 ZNF711Q9Y462 761 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 SPO11Q9Y5K1 396 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 CAPN6Q9Y6Q1 641 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 URB1O60287 2271 aaKnown RBP21.04■□□□□ 0.96
LIME1-204ENST00000476183 FADS2P1A8MWK0 482 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 DDX3YO15523 660 aaKnown RBP21.04■□□□□ 0.96
LIME1-204ENST00000476183 NOBOXO60393 691 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 PYGLP06737 847 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 TMC3Q7Z5M5 1100 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 MRGPRX2Q96LB1 330 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 CCDC3Q9BQI4 270 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 SPATS2LQ9NUQ6 558 aaKnown RBP21.04■□□□□ 0.96
LIME1-204ENST00000476183 TRNAU1APQ9NX07 287 aaKnown RBP21.04■□□□□ 0.96
LIME1-204ENST00000476183 PLEKHM1Q9Y4G2 1056 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 ADGRG1Q9Y653 693 aa21.04■□□□□ 0.96
LIME1-204ENST00000476183 OAS3Q9Y6K5 1087 aaKnown RBP21.04■□□□□ 0.96
LIME1-204ENST00000476183 LOC285095A0A1B0GVY8 99 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 RGSL1A5PLK6 1076 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 GOLGA6L6A8MZA4 724 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 B4DGG1 531 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 AURKAO14965 403 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 SLC4A1P02730 911 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 AK4P27144 223 aaPredicted RBP21.03■□□□□ 0.96
LIME1-204ENST00000476183 ADCY8P40145 1251 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 SYCE1Q8N0S2 351 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 TXLNBQ8N3L3 684 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 GPR26Q8NDV2 337 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 CCDC74AQ96AQ1 378 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 GORASP1Q9BQQ3 440 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 NRSN2Q9GZP1 204 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 PCYT1BQ9Y5K3 369 aaPredicted RBP21.03■□□□□ 0.96
LIME1-204ENST00000476183 SCN8AQ9UQD0 1980 aa21.03■□□□□ 0.96
LIME1-204ENST00000476183 CSO75390 466 aaKnown RBP21.02■□□□□ 0.96
LIME1-204ENST00000476183 CHRNA4P43681 627 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 GSDMDP57764 484 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 EIF3EP60228 445 aaKnown RBP21.02■□□□□ 0.96
LIME1-204ENST00000476183 CTBSQ01459 385 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 RTP5Q14D33 572 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 MARK2Q7KZI7 788 aaKnown RBP21.02■□□□□ 0.96
LIME1-204ENST00000476183 NXPE2Q96DL1 559 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 DEPDC7Q96QD5 511 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 GSDMCQ9BYG8 508 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 DPEP2Q9H4A9 486 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 TAAR2Q9P1P5 351 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 RSPH14Q9UHP6 348 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 TRHDEQ9UKU6 1024 aa21.02■□□□□ 0.96
LIME1-204ENST00000476183 KIF26BQ2KJY2 2108 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 MIF4GDA9UHW6 222 aaKnown RBP21.01■□□□□ 0.95
LIME1-204ENST00000476183 TJP3O95049 919 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 ATP1A1P05023 1023 aaKnown RBP21.01■□□□□ 0.95
LIME1-204ENST00000476183 FGF1P05230 155 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 RBP3P10745 1247 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 ILF3Q12906 894 aaKnown RBP eCLIP21.01■□□□□ 0.95
LIME1-204ENST00000476183 HLTFQ14527 1009 aaKnown RBP eCLIP21.01■□□□□ 0.95
LIME1-204ENST00000476183 PYCR3Q53H96 274 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 SIRPB2Q5JXA9 342 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 ALS2CLQ60I27 953 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 CCDC70Q6NSX1 233 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 CDKL3Q8IVW4 592 aaPredicted RBP21.01■□□□□ 0.95
LIME1-204ENST00000476183 SLC25A41Q8N5S1 370 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 UBL4BQ8N7F7 174 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 IPMKQ8NFU5 416 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 HES6Q96HZ4 224 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 GPR63Q9BZJ6 419 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 GBA3Q9H227 469 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 RAXQ9Y2V3 346 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 GPSM3Q9Y4H4 160 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 UNC13CQ8NB66 2214 aa21.01■□□□□ 0.95
LIME1-204ENST00000476183 ZFC3H1O60293 1989 aaKnown RBP21.01■□□□□ 0.95
LIME1-204ENST00000476183 ZFYVE26Q68DK2 2539 aa21■□□□□ 0.95
LIME1-204ENST00000476183 NTN3O00634 580 aaPredicted RBP21■□□□□ 0.95
LIME1-204ENST00000476183 DNAJC6O75061 913 aa21■□□□□ 0.95
LIME1-204ENST00000476183 ASMTLO95671 621 aa21■□□□□ 0.95
LIME1-204ENST00000476183 EPOP01588 193 aa21■□□□□ 0.95
LIME1-204ENST00000476183 BPIP17213 487 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms