RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 INPP4BO15327 924 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 BRINP1O60477 761 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 PMPCBO75439 489 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 NDST3O95803 873 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 GLB1P16278 677 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 NFKB1P19838 968 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 PTPN7P35236 360 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 XRCC4Q13426 336 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 SPIDRQ14159 915 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 NOMO1Q15155 1222 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 C14orf28Q4W4Y0 310 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 CERCAMQ5T4B2 595 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 CCDC181Q5TID7 509 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 CCDC70Q6NSX1 233 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 TXLNBQ8N3L3 684 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 LRRC57Q8N9N7 239 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 HTR3CQ8WXA8 447 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 OR2M4Q96R27 311 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 UBP1Q9NZI7 540 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 FAM153AQ9UHL3 310 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 ZNF711Q9Y462 761 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 GPSM3Q9Y4H4 160 aa22.41■■□□□ 1.18
PTP4A1-203ENST00000473334 GRID2IPA4D2P6 1211 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 PIRTP0C851 137 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 AK4P27144 223 aaPredicted RBP22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 ADCY8P40145 1251 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 RWDD2BP57060 319 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 CTBSQ01459 385 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 HLTFQ14527 1009 aaKnown RBP eCLIP22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 SFTPA2Q8IWL1 248 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 ZNF567Q8N184 647 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 EID2BQ96D98 161 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 SRPK1Q96SB4 655 aaKnown RBP22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 SPATS2LQ9NUQ6 558 aaKnown RBP22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 TAAR2Q9P1P5 351 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 APPL1Q9UKG1 709 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 SHOC2Q9UQ13 582 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 ENTPD2Q9Y5L3 495 aa22.4■■□□□ 1.18
PTP4A1-203ENST00000473334 LAMA5O15230 3695 aa22.39■■□□□ 1.18
PTP4A1-203ENST00000473334 FADS2P1A8MWK0 482 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 GOLGA6L6A8MZA4 724 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 H7C0C1 242 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 CASC3O15234 703 aaKnown RBP22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 ASMTLO95671 621 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 PNLIPP16233 465 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 ATP5OP48047 213 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 DCDC1P59894 354 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 GABREP78334 506 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 KIF5AQ12840 1032 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 PEX6Q13608 980 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 SLC30A9Q6PML9 568 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 KDELC1Q6UW63 502 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 MARK2Q7KZI7 788 aaKnown RBP22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 PID1Q7Z2X4 250 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 TMC3Q7Z5M5 1100 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 ZDHHC1Q8WTX9 485 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 FCRL5Q96RD9 977 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 GFM1Q96RP9 751 aaKnown RBP22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 HERPUD2Q9BSE4 406 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 OSBPL8Q9BZF1 889 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 GPR63Q9BZJ6 419 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 RAD18Q9NS91 495 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 VPS18Q9P253 973 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 TRHDEQ9UKU6 1024 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 CNOT6Q9ULM6 557 aaKnown RBP22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 ST14Q9Y5Y6 855 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 ZFC3H1O60293 1989 aaKnown RBP22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 SCN8AQ9UQD0 1980 aa22.39■■□□□ 1.17
PTP4A1-203ENST00000473334 CELSR3Q9NYQ7 3312 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 ADAMTS20P59510 1910 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 A0A087WV48 116 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 MACROD2A1Z1Q3 448 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 TLX3O43711 291 aaPredicted RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 SLC4A1P02730 911 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 MPOP05164 745 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 FGF1P05230 155 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 RPLP0P05388 317 aaKnown RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 ACTN2P35609 894 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 CETN2P41208 172 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 WNT3AP56704 352 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 CCL7P80098 99 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 OTUD4Q01804 1114 aaKnown RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 PYCR3Q53H96 274 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 GALNT13Q8IUC8 556 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 CCNJLQ8IV13 435 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 LSMEM2Q8N112 164 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 SNIP1Q8TAD8 396 aaKnown RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 ACTL9Q8TC94 416 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 ALG3Q92685 438 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 ATXN7L3BQ96GX2 97 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 DESI2Q9BSY9 194 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 POLR1BQ9H9Y6 1135 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 LRIT1Q9P2V4 623 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 NFKBIL1Q9UBC1 381 aaPredicted RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 AMFRQ9UKV5 643 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 OAS3Q9Y6K5 1087 aaKnown RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 RNF215Q9Y6U7 377 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 CHD6Q8TD26 2715 aa22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 URB1O60287 2271 aaKnown RBP22.38■■□□□ 1.17
PTP4A1-203ENST00000473334 LOC285095A0A1B0GVY8 99 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms