RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 YWHAEP62258 255 aaKnown RBP8.12□□□□□ -1.11
LSM2-210ENST00000470086 CDK3Q00526 305 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 ILF3Q12906 894 aaKnown RBP eCLIP8.12□□□□□ -1.112e-7■■□□□ 14.4
LSM2-210ENST00000470086 KCNAB1Q14722 419 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 RABEP1Q15276 862 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 CYTH1Q15438 398 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 STILQ15468 1287 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 CNGA3Q16281 694 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 PNCKQ6P2M8 343 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 WDR74Q6RFH5 385 aaPredicted RBP8.12□□□□□ -1.11
LSM2-210ENST00000470086 ZNF783Q6ZMS7 281 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 SLC26A9Q7LBE3 791 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 CDH24Q86UP0 819 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 CAMK1DQ8IU85 385 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 GUF1Q8N442 669 aaKnown RBP8.12□□□□□ -1.11
LSM2-210ENST00000470086 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 STK32AQ8WU08 396 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 ZNF606Q8WXB4 792 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 COQ10AQ96MF6 247 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 NT5C1BQ96P26 610 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 PPP1R9BQ96SB3 815 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 MDFIQ99750 246 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 ZPBPQ9BS86 351 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 GSX1Q9H4S2 264 aaPredicted RBP8.12□□□□□ -1.11
LSM2-210ENST00000470086 ACSS2Q9NR19 701 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 ASNSD1Q9NWL6 643 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 PRKAB1Q9Y478 270 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
LSM2-210ENST00000470086 ANK3Q12955 4377 aaKnown RBP8.12□□□□□ -1.11
LSM2-210ENST00000470086 THAP12O43422 761 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 DPM1O60762 260 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 IGSF6O95976 241 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 C9P02748 559 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 HOXC4P09017 264 aaPredicted RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 ANKRD34CP0C6C1 535 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 ELFN1P0C7U0 828 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 EPB41P11171 864 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 PFKFB1P16118 471 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 GNA15P30679 374 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 GARSP41250 739 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 PPM1FP49593 454 aaPredicted RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 RNASE9P60153 205 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 RHOAP61586 193 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 HHEXQ03014 270 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 SRSF11Q05519 484 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 ELP6Q0PNE2 266 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 ATP1A4Q13733 1029 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 EFHC1Q5JVL4 640 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 BRMS1LQ5PSV4 323 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 PRAMEF17Q5VTA0 474 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 PWWP2BQ6NUJ5 590 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 MARK2Q7KZI7 788 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 LYSMD3Q7Z3D4 306 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 KCNMB4Q86W47 210 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 IQCKQ8N0W5 287 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 SLC38A9Q8NBW4 561 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 ATL2Q8NHH9 583 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 RSC1A1Q92681 617 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 AHCYL2Q96HN2 611 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 C9orf72Q96LT7 481 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 CFAP57Q96MR6 1250 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 AGAP2Q99490 1192 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 SMAD5Q99717 465 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 TEX101Q9BY14 249 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 WDCPQ9H6R7 721 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 PDFQ9HBH1 243 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 TRNAU1APQ9NX07 287 aaKnown RBP8.11□□□□□ -1.11
LSM2-210ENST00000470086 B4GALT6Q9UBX8 382 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 TBC1D29Q9UFV1 150 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 SLC17A4Q9Y2C5 497 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 TMEM98Q9Y2Y6 226 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 MFHAS1Q9Y4C4 1052 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 ZNF451Q9Y4E5 1061 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 SLC30A1Q9Y6M5 507 aa8.11□□□□□ -1.11
LSM2-210ENST00000470086 RTTNQ86VV8 2226 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 FN1P02751 2386 aaKnown RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 A0A1B0GVL5 298 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 ESPNB1AK53 854 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 NADKO95544 446 aaPredicted RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 YEATS4O95619 227 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 GLI1P08151 1106 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 FGF5P12034 268 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 KRT5P13647 590 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 ETV3P41162 512 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 DEUP1Q05D60 604 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 SLC20A2Q08357 652 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 GPS2Q13227 327 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 POLD3Q15054 466 aaPredicted RBP8.1□□□□□ -1.11
LSM2-210ENST00000470086 LLGL1Q15334 1064 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 DPPA4Q7L190 304 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 HSD11B1LQ7Z5J1 315 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 TSPAN33Q86UF1 283 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 RASGRP3Q8IV61 690 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 CCDC185Q8N715 623 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 ST6GALNAC3Q8NDV1 305 aa8.1□□□□□ -1.11
LSM2-210ENST00000470086 OR10G6Q8NH81 332 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms