RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CHRNB2P17787 502 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CD58P19256 250 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DRD1P21728 446 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ACAT1P24752 427 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 GTF2H1P32780 548 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RDXP35241 583 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 AARSP49588 968 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF132P52740 706 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CACNA2D1P54289 1103 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 LILRA4P59901 499 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PSMC1P62191 440 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TPM4P67936 248 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 MRPS35P82673 323 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CCZ1BP86790 482 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CCZ1P86791 482 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ITKQ08881 620 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CUL2Q13617 745 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RUNX3Q13761 415 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RAPGEF1Q13905 1077 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 HNRNPDQ14103 355 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DRAP1Q14919 205 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF699Q32M78 642 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 UAP1L1Q3KQV9 507 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SPDYCQ5MJ68 293 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 WSCD1Q658N2 575 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SPECC1LQ69YQ0 1117 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RAD9BQ6WBX8 426 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 GBP6Q6ZN66 633 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DNAJB7Q7Z6W7 309 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SLC47A2Q86VL8 602 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ELMOD1Q8N336 334 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 C17orf53Q8N3J3 647 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PDCL2Q8N4E4 241 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 LSM14AQ8ND56 463 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TTC8Q8TAM2 541 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 IFI44Q8TCB0 444 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 BPIFB1Q8TDL5 484 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ACTRT2Q8TDY3 377 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TFAP2BQ92481 460 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SHC3Q92529 594 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 FUBP1Q96AE4 644 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ANKRD36BP1Q96IX9 119 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PCDHB18PQ96TA0 734 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DUSP26Q9BV47 211 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PLCB1Q9NQ66 1216 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 HPS4Q9NQG7 708 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 GKN1Q9NS71 199 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TMLHEQ9NVH6 421 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 LRIT1Q9P2V4 623 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ITGA11Q9UKX5 1188 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PYCARDQ9ULZ3 195 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DERAQ9Y315 318 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ASB3Q9Y575 518 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SNX9Q9Y5X1 595 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 COX11Q9Y6N1 276 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 VWA8A3KMH1 1905 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 APC2O95996 2303 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 URB1O60287 2271 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TRGV11A0A075B6L2 103 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC154A6NI56 674 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 KPNA7A9QM74 516 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TULP2O00295 520 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CLDN5O00501 218 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 P4HA2O15460 535 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 HTRA2O43464 458 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 KATNA1O75449 491 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 HAUS5O94927 633 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 IGLV2-14P01704 120 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 BCKDHBP21953 392 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 GATA3P23771 443 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RPL9P32969 192 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 KRT9P35527 623 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DEKP35659 375 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TAF6P49848 677 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CDKN1CP49918 316 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RAD23BP54727 409 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 RBP5P82980 135 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 POU5F1Q01860 360 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ENPEPQ07075 957 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 DMC1Q14565 340 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 KYAT1Q16773 422 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CTXN3Q4LDR2 81 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 STXBP5Q5T5C0 1151 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF571Q7Z3V5 609 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 IRF2BP2Q7Z5L9 587 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CD302Q8IX05 232 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 C12orf29Q8N999 325 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SLC4A11Q8NBS3 891 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 APPL2Q8NEU8 664 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SLC30A5Q8TAD4 765 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 LRIG1Q96JA1 1093 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 SENP8Q96LD8 212 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 NT5C1BQ96P26 610 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PKMYT1Q99640 499 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TASP1Q9H6P5 420 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CISHQ9NSE2 258 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 ABHD10Q9NUJ1 306 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 KCTD5Q9NXV2 234 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TAS2R14Q9NYV8 317 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms