RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
RTN4-210ENST00000427710 CNOT6Q9ULM6 557 aaKnown RBP14.8□□□□□ -0.04
RTN4-210ENST00000427710 SUFUQ9UMX1 484 aa14.8□□□□□ -0.04
RTN4-210ENST00000427710 PCYT1BQ9Y5K3 369 aaPredicted RBP14.8□□□□□ -0.04
RTN4-210ENST00000427710 OAS3Q9Y6K5 1087 aaKnown RBP14.8□□□□□ -0.04
RTN4-210ENST00000427710 MIF4GDA9UHW6 222 aaKnown RBP14.79□□□□□ -0.04
RTN4-210ENST00000427710 PDE2AO00408 941 aaPredicted RBP14.79□□□□□ -0.04
RTN4-210ENST00000427710 TNFRSF10CO14798 259 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 KRT86O43790 486 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 ASMTLO95671 621 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 AGTP01019 485 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 ATP1A1P05023 1023 aaKnown RBP14.79□□□□□ -0.04
RTN4-210ENST00000427710 PSMB4P28070 264 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 TEAD1P28347 426 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 DUSP3P51452 185 aaPredicted RBP14.79□□□□□ -0.04
RTN4-210ENST00000427710 TARDBPQ13148 414 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTN4-210ENST00000427710 ILKQ13418 452 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 SLC14A2Q15849 920 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 ANKRD20A2Q5SQ80 823 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 ANKRD20A1Q5TYW2 823 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 ANKRD20A3Q5VUR7 823 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 CCDC70Q6NSX1 233 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 ZNF765Q7L2R6 523 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 TMPRSS12Q86WS5 348 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 GPR26Q8NDV2 337 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 FAM46DQ8NEK8 389 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 MDM1Q8TC05 714 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 HIC2Q96JB3 615 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 APOL2Q9BQE5 337 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 FICDQ9BVA6 458 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 GBA3Q9H227 469 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 FAM83DQ9H4H8 585 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 USP29Q9HBJ7 922 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 TRHDEQ9UKU6 1024 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 PRKAB1Q9Y478 270 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 GPSM3Q9Y4H4 160 aa14.79□□□□□ -0.04
RTN4-210ENST00000427710 PIKFYVEQ9Y2I7 2098 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 LOC285095A0A1B0GVY8 99 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 TRABD2BA6NFA1 517 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 B4DGG1 531 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
RTN4-210ENST00000427710 OPA1O60313 960 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 MT-CO3P00414 261 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 KLF1Q13351 362 aaPredicted RBP14.78□□□□□ -0.04
RTN4-210ENST00000427710 CAMK2BQ13554 666 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 HENMT1Q5T8I9 393 aaKnown RBP14.78□□□□□ -0.04
RTN4-210ENST00000427710 TMC3Q7Z5M5 1100 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 NRROSQ86YC3 692 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 TAB3Q8N5C8 712 aaPredicted RBP14.78□□□□□ -0.04
RTN4-210ENST00000427710 MAPK15Q8TD08 544 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 ATG4AQ8WYN0 398 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 ZCCHC14Q8WYQ9 949 aaKnown RBP14.78□□□□□ -0.04
RTN4-210ENST00000427710 GLMNQ92990 594 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 COX14Q96I36 57 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 VAT1Q99536 393 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 SPATA16Q9BXB7 569 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 SYNDIG1Q9H7V2 258 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 MAGEE1Q9HCI5 957 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 RABGEF1Q9UJ41 708 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 PADI4Q9UM07 663 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 SLC17A4Q9Y2C5 497 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 ST14Q9Y5Y6 855 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 DMXL2Q8TDJ6 3036 aa14.78□□□□□ -0.04
RTN4-210ENST00000427710 ZNF106Q9H2Y7 1883 aaKnown RBP14.78□□□□□ -0.04
RTN4-210ENST00000427710 ANKRD11Q6UB99 2663 aaPredicted RBP14.77□□□□□ -0.04
RTN4-210ENST00000427710 EME2A4GXA9 379 aaPredicted RBP14.77□□□□□ -0.05
RTN4-210ENST00000427710 CCDC175P0C221 793 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 BPIP17213 487 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 ADCY8P40145 1251 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 E2F1Q01094 437 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 CTBSQ01459 385 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 MPP3Q13368 585 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 SPARCL1Q14515 664 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 PTPRCAPQ14761 206 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 SLC1A5Q15758 541 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 SEL1L2Q5TEA6 688 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 SLC30A9Q6PML9 568 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 NLRP8Q86W28 1048 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 ARL10Q8N8L6 244 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 FAM71DQ8N9W8 422 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 BLOC1S5Q8TDH9 187 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 SCG3Q8WXD2 468 aaKnown RBP14.77□□□□□ -0.05
RTN4-210ENST00000427710 CCDC74AQ96AQ1 378 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 DPEP2Q9H4A9 486 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 SPATS2LQ9NUQ6 558 aaKnown RBP14.77□□□□□ -0.05
RTN4-210ENST00000427710 EVA1BQ9NVM1 165 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 ZMIZ1Q9ULJ6 1067 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 CLCA2Q9UQC9 943 aa14.77□□□□□ -0.05
RTN4-210ENST00000427710 FREM2Q5SZK8 3169 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 GOLGA6L9A6NEM1 432 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 GOLGA6L3A6NEY3 463 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 TAF4O00268 1085 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 NOBOXO60393 691 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 IVLP07476 585 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 CDK4P11802 303 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 RPIAP49247 311 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 GEMP55040 296 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 GDF10P55107 478 aa14.76□□□□□ -0.05
RTN4-210ENST00000427710 MAZP56270 477 aaKnown RBP14.76□□□□□ -0.05
RTN4-210ENST00000427710 CYP4F3Q08477 520 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms