RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PCDHB9Q9Y5E1 797 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 RAI2Q9Y5P3 530 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PLXND1Q9Y4D7 1925 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 CACNA1HO95180 2353 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 WDR87Q6ZQQ6 2873 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 NDUFS2O75306 463 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 USP12O75317 370 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 RFPL1O75677 317 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 PDHA1P08559 390 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 SERPINF2P08697 491 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 DHRS4L1P0CG22 281 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 ADRB3P13945 408 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 CES1P23141 567 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 ADRA1DP25100 572 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 CSE1LP55060 971 aaKnown RBP15.61■□□□□ 0.09
SHOX2-202ENST00000425436 TAS2R38P59533 333 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 RPL6Q02878 288 aaKnown RBP15.61■□□□□ 0.09
SHOX2-202ENST00000425436 SIM2Q14190 667 aaPredicted RBP15.61■□□□□ 0.09
SHOX2-202ENST00000425436 LPAL2Q16609 132 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 INSCQ1MX18 579 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 RALGPS1Q5JS13 557 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 RANBP10Q6VN20 620 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 PRR23BQ6ZRT6 265 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 CCDC121Q6ZUS5 278 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 FGFR1OP2Q9NVK5 253 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 DCDC2Q9UHG0 476 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 FZD4Q9ULV1 537 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 CHKBQ9Y259 395 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 PLLPQ9Y342 182 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 DOCK9Q9BZ29 2069 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 MUC6Q6W4X9 2439 aa15.61■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3DA0A087WVF3 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3IA0A087WXS9 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3EA0A087X179 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3KA0A087X1G2 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ZCWPW2A0A1B0GU75 182 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3FA6NER0 549 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3LB9A6J9 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 GOLGA8RI6L899 631 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 PMPCBO75439 489 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3HP0C7X1 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 FOXN2P32314 431 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 CNR2P34972 360 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ABL2P42684 1182 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 POLD2P49005 469 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ADPRHP54922 357 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 PDE1BQ01064 536 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 IFT88Q13099 833 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 PTPRRQ15256 657 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 SLC14A2Q15849 920 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 PCSK7Q16549 785 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 UGP2Q16851 508 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 CERCAMQ5T4B2 595 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 MROH9Q5TGP6 573 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3GQ6DHY5 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3CQ6IPX1 549 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 KYAT3Q6YP21 454 aaKnown RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 NLRP9Q7RTR0 991 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 SPATA21Q7Z572 469 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 TBC1D3Q8IZP1 549 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 IPMKQ8NFU5 416 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 RAB3IL1Q8TBN0 382 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ZNF75CPQ92670 426 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ECHDC3Q96DC8 303 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 FCRL3Q96P31 734 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 SMIM14Q96QK8 99 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 SRPK1Q96SB4 655 aaKnown RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 FICDQ9BVA6 458 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 DUSP15Q9H1R2 295 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 KCNH6Q9H252 994 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 KDM4CQ9H3R0 1056 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 C6orf106Q9H6K1 298 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 SGK2Q9HBY8 427 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 DKK3Q9UBP4 350 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 GGT7Q9UJ14 662 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 GRID1Q9ULK0 1009 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ITM2BQ9Y287 266 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 ARL2BPQ9Y2Y0 163 aa15.6■□□□□ 0.09
SHOX2-202ENST00000425436 RRP15Q9Y3B9 282 aaKnown RBP15.6■□□□□ 0.09
SHOX2-202ENST00000425436 GON4LQ3T8J9 2241 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 A8MX80 341 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 KLF11O14901 512 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 HTRA2O43464 458 aaPredicted RBP15.59■□□□□ 0.09
SHOX2-202ENST00000425436 PLRG1O43660 514 aaKnown RBP15.59■□□□□ 0.09
SHOX2-202ENST00000425436 PGLSO95336 258 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 SEMA4FO95754 770 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 EPOP01588 193 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 ITGA2BP08514 1039 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 XPAP23025 273 aaPredicted RBP15.59■□□□□ 0.09
SHOX2-202ENST00000425436 ETV4P43268 484 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 WNT3AP56704 352 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 ZC3H14Q6PJT7 736 aaKnown RBP15.59■□□□□ 0.09
SHOX2-202ENST00000425436 ARMCX6Q7L4S7 300 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 NDUFAF2Q8N183 169 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 GBP7Q8N8V2 638 aaPredicted RBP15.59■□□□□ 0.09
SHOX2-202ENST00000425436 FAM131CQ96AQ9 280 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 MRGPRX2Q96LB1 330 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 RANBP9Q96S59 729 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 MANSC1Q9H8J5 431 aa15.59■□□□□ 0.09
SHOX2-202ENST00000425436 CHRAC1Q9NRG0 131 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms