RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 BLOC1S5Q8TDH9 187 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 C1orf54Q8WWF1 131 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 HIC2Q96JB3 615 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FICDQ9BVA6 458 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 BOCQ9BWV1 1114 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CARD9Q9H257 536 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SIRPGQ9P1W8 387 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CNOT6Q9ULM6 557 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SUFUQ9UMX1 484 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DOLKQ9UPQ8 538 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PCDHGA1Q9Y5H4 931 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 BPTFQ12830 3046 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ACACBO00763 2458 aa14.01□□□□□ -0.17
HLA-DQB1-202ENST00000399079 C5orf60A6NFR6 353 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 BUD23O43709 281 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 USP12O75317 370 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 METTL18O95568 372 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 BPIP17213 487 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 HLA-DPA1P20036 260 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ADRA1AP35348 466 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GNPDA1P46926 289 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SNX1Q13596 522 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SPARCL1Q14515 664 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 C6orf132Q5T0Z8 1188 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RANBP10Q6VN20 620 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ARHGEF18Q6ZSZ5 1173 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 MARK2Q7KZI7 788 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TAF8Q7Z7C8 310 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SFTPA2Q8IWL1 248 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 REXO1L1PQ8IX06 675 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TAB3Q8N5C8 712 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 COX14Q96I36 57 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PDLIM2Q96JY6 352 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SPATA16Q9BXB7 569 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ARFGAP3Q9NP61 516 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SLC17A4Q9Y2C5 497 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 AAR2Q9Y312 384 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 NEUROG3Q9Y4Z2 214 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ST14Q9Y5Y6 855 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 OAS3Q9Y6K5 1087 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CELSR3Q9NYQ7 3312 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CPED1A4D0V7 1026 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RGSL1A5PLK6 1076 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 LIASO43766 372 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ASMTLO95671 621 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PYGLP06737 847 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 HMGCLP35914 325 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PRPSAP1Q14558 356 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 OASLQ15646 514 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SMAD1Q15797 465 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GUSBP11Q6P575 273 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TMPRSS7Q7RTY8 843 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GLT6D1Q7Z4J2 308 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GKN2Q86XP6 184 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TTC30BQ8N4P2 665 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TRMT1Q9NXH9 659 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GULP1Q9UBP9 304 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GPR34Q9UPC5 381 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 MSRB2Q9Y3D2 182 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PLEKHM1Q9Y4G2 1056 aa14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PCYT1BQ9Y5K3 369 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FAM221BA6H8Z2 402 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 C1QTNF9BB2RNN3 333 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CASC3O15234 703 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FGGP02679 453 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FGF1P05230 155 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 C1QTNF9P0C862 333 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 AK4P27144 223 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PTPRCAPQ14761 206 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SIX1Q15475 284 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZNF648Q5T619 568 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 LVRNQ6Q4G3 990 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PRUNE1Q86TP1 453 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 NRROSQ86YC3 692 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KYQ8NBH2 561 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FAM46DQ8NEK8 389 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 IFI44Q8TCB0 444 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SCG3Q8WXD2 468 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SRPK1Q96SB4 655 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TRABDQ9H4I3 376 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PRKAB1Q9Y478 270 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ARL5AQ9Y689 179 aa13.99□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PTPRBP23467 1997 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ASXL3Q9C0F0 2248 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 EME2A4GXA9 379 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CEP104O60308 925 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 IFNB1P01574 187 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ADCY8P40145 1251 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DUSP3P51452 185 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DCDC1P59894 354 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CTBSQ01459 385 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ILKQ13418 452 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 NR0B2Q15466 257 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KCTD19Q17RG1 926 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PARP6Q2NL67 630 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PERM1Q5SV97 790 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 HES3Q5TGS1 186 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DENND5AQ6IQ26 1287 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms