RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 FAM35AQ86V20 835 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 SLC22A15Q8IZD6 547 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 ZSCAN1Q8NBB4 408 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 AUTS2Q8WXX7 1259 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 SGCDQ92629 289 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 B3GALT6Q96L58 329 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CDT1Q9H211 546 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 TMEM134Q9H6X4 195 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 UBE2QL1A1L167 161 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 TSPAN9O75954 239 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 OTCP00480 354 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 RLN1P04808 185 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 IFNA6P05013 189 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 ARL3P36405 182 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 FSTL1Q12841 308 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 DLG1Q12959 904 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CYB5D1Q6P9G0 228 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 UBE2J2Q8N2K1 259 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CYB5D2Q8WUJ1 264 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 WDR60Q8WVS4 1066 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 RXFP1Q9HBX9 757 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CHST7Q9NS84 486 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 PXDNLA1KZ92 1463 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 RECQL5O94762 991 aaPredicted RBP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 C9P02748 559 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 PTPN2P17706 415 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 SMARCD3Q6STE5 483 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 PPTC7Q8NI37 304 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CERS2Q96G23 380 aa14.07□□□□□ -0.16
TRIM13-202ENST00000378182 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM13-202ENST00000378182 MT-CYBP00156 380 aaPredicted RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 STAT5AP42229 794 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 APBB2Q92870 758 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 Q96MT0 163 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 TBC1D14Q9P2M4 693 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 A8MUI8 341 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 WRBO00258 174 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 KHNYNO15037 678 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 TMCC2O75069 709 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 CDK14O94921 469 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 TRBC1P01850 177 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 GLI1P08151 1106 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 HSD3B2P26439 372 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 MAMLD1Q13495 774 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 MLIPQ5VWP3 458 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 UPF1Q92900 1129 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 VAT1Q99536 393 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 BTBD10Q9BSF8 475 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 B3GNT5Q9BYG0 378 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ARHGAP20Q9P2F6 1191 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 SNX10Q9Y5X0 201 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ZSCAN5CA6NGD5 496 aaPredicted RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 SIN3BO75182 1162 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ITGA2P17301 1181 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 CCKBRP32239 447 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ARF3P61204 181 aaPredicted RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ARF1P84077 181 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 KDM7AQ6ZMT4 941 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 C12orf56Q8IXR9 622 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 FAM129BQ96TA1 746 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 KBTBD4Q9NVX7 518 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ERGIC3Q9Y282 383 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 TMA7Q9Y2S6 64 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 RWDD3Q9Y3V2 267 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ASTN2O75129 1339 aaPredicted RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 KLRG2A4D1S0 409 aaPredicted RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PRKCHP24723 683 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 RPL3P39023 403 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 NAGLUP54802 743 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 RAB25P57735 213 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 CAP1Q01518 475 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PPP3CAQ08209 521 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 KCTD21Q4G0X4 260 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 UBXN11Q5T124 520 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 MZT2BQ6NZ67 158 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 ANKRD52Q8NB46 1076 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PPP3R2Q96LZ3 170 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 C11orf49Q9H6J7 331 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 AGO3Q9H9G7 860 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 SEC14L3Q9UDX4 400 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PADI3Q9ULW8 664 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PLAGL2Q9UPG8 496 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 WTIPA6NIX2 430 aaPredicted RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 H7C0S8 307 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 FPGTO14772 594 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 SNRPB2P08579 225 aaKnown RBP14.06□□□□□ -0.16
TRIM13-202ENST00000378182 FPGSQ05932 587 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 TLR1Q15399 786 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 TAB1Q15750 504 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 SPESP1Q6UW49 350 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 BSNDQ8WZ55 320 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 CYB5AP00167 134 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PTPN4P29074 926 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 PTENP60484 403 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 CAPSQ13938 189 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 NIPA1Q7RTP0 329 aa14.06□□□□□ -0.16
TRIM13-202ENST00000378182 OTOP3Q7RTS5 596 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms