RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NFE2Q16621 373 aaPredicted RBP14.04□□□□□ -0.16
SREBF1-202ENST00000355815 ZFP69Q49AA0 526 aa14.04□□□□□ -0.16
SREBF1-202ENST00000355815 GCNT7Q6ZNI0 430 aa14.04□□□□□ -0.16
SREBF1-202ENST00000355815 RHOJQ9H4E5 214 aa14.04□□□□□ -0.16
SREBF1-202ENST00000355815 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.04□□□□□ -0.161e-8■■■■■ 31.6
SREBF1-202ENST00000355815 GMIPQ9P107 970 aa14.04□□□□□ -0.16
SREBF1-202ENST00000355815 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
SREBF1-202ENST00000355815 TIMM22Q9Y584 194 aa14.04□□□□□ -0.16
SREBF1-202ENST00000355815 A6NHS1 94 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 RPL17P18621 184 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 ALDH7A1P49419 539 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TAF10Q12962 218 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 IL23RQ5VWK5 629 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 SPRYD7Q5W111 196 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 RNF180Q86T96 592 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 PSMG2Q969U7 264 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 PPM1MQ96MI6 270 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 SERPINB11Q96P15 392 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TRMT6Q9UJA5 497 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 KIAA0100Q14667 2235 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 CLDN25C9JDP6 229 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 E7ESA3 106 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 F8W810 466 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 PQBP1O60828 265 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 GABBR2O75899 941 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TGDSO95455 350 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 GSTM1P09488 218 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 ADGRE1Q14246 886 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 MYBPC3Q14896 1274 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 LIPMQ5VYY2 423 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 PKN3Q6P5Z2 889 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 POTEHQ6S545 545 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TRIM69Q86WT6 500 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 VPS33AQ96AX1 596 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TEKT5Q96M29 485 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 VAT1Q99536 393 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 YIPF2Q9BWQ6 316 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 EIF3LQ9Y262 564 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 SLC9A8Q9Y2E8 581 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 MRPS7Q9Y2R9 242 aaKnown RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 NUP205Q92621 2012 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 SNAP91O60641 907 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 TMCC2O75069 709 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 CHRM5P08912 532 aaPredicted RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 LINC00032P0C843 101 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 SLC2A3P11169 496 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 ZNF182P17025 639 aaPredicted RBP14.03□□□□□ -0.16
SREBF1-202ENST00000355815 OXCT1P55809 520 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 FCGRTP55899 365 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 SPDYE7PQ495Y7 208 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 DENND5AQ6IQ26 1287 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 LINGO4Q6UY18 593 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 FEM1AQ9BSK4 669 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 DPY30Q9C005 99 aa14.03□□□□□ -0.16
SREBF1-202ENST00000355815 CST1P01037 141 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 AHSGP02765 367 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 FTH1P02794 183 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 HIST1H2AGP0C0S8 130 aaPredicted RBP14.02□□□□□ -0.16
SREBF1-202ENST00000355815 HIST1H2ADP20671 130 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 PIK3CGP48736 1102 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 CCL23P55773 120 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 FAM187BQ17R55 369 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 VPS26BQ4G0F5 336 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 DENND1CQ8IV53 801 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 FBXO39Q8N4B4 442 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 HIST1H2AHQ96KK5 128 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 HIST1H2AJQ99878 128 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 PKP2Q99959 881 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 H2AFJQ9BTM1 129 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 C20orf27Q9GZN8 174 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 MIR1-1HGQ9H1L0 117 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 KRT84Q9NSB2 600 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 CDV3Q9UKY7 258 aaKnown RBP14.02□□□□□ -0.16
SREBF1-202ENST00000355815 KCTD3Q9Y597 815 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 CAPN15O75808 1086 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 HDCP19113 662 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 FUT4P22083 530 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 PRKCHP24723 683 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 TMEM53Q6P2H8 277 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 HEXDCQ8WVB3 486 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 APBB2Q92870 758 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 WDR83Q9BRX9 315 aaKnown RBP14.02□□□□□ -0.16
SREBF1-202ENST00000355815 ADI1Q9BV57 179 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 AGO3Q9H9G7 860 aaKnown RBP14.02□□□□□ -0.16
SREBF1-202ENST00000355815 AMBNQ9NP70 447 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 SSU72Q9NP77 194 aaKnown RBP14.02□□□□□ -0.16
SREBF1-202ENST00000355815 KLHL3Q9UH77 587 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 KCNH4Q9UQ05 1017 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 DERAQ9Y315 318 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 GMPPBQ9Y5P6 360 aa14.02□□□□□ -0.16
SREBF1-202ENST00000355815 CKMP06732 381 aa14.02□□□□□ -0.17
SREBF1-202ENST00000355815 RHOCP08134 193 aa14.02□□□□□ -0.17
SREBF1-202ENST00000355815 SPATA31D3P0C874 917 aa14.02□□□□□ -0.17
SREBF1-202ENST00000355815 MLNP12872 115 aa14.02□□□□□ -0.17
SREBF1-202ENST00000355815 CDH18Q13634 790 aa14.02□□□□□ -0.17
SREBF1-202ENST00000355815 SPATA31D4Q6ZUB0 917 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms