RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PIPSLA2A3N6 862 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 NPIPB15A6NHN6 443 aaPredicted RBP16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 KIAA0754O94854 1291 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 LDLRP01130 860 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 GPD1P21695 349 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 TEAD1P28347 426 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 MTIF2P46199 727 aaKnown RBP16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 NDST2P52849 883 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 FMO1Q01740 532 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 NSUN2Q08J23 767 aaKnown RBP eCLIP16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 PEX6Q13608 980 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 KLHDC7AQ5VTJ3 777 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 TECPR1Q7Z6L1 1165 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 ARHGAP12Q8IWW6 846 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 TP53INP2Q8IXH6 220 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 Q8NA96 180 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 ELMO2Q96JJ3 720 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 AGAP2Q99490 1192 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 ZNF768Q9H5H4 540 aaKnown RBP16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 AKIRIN1Q9H9L7 192 aaPredicted RBP16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 SARS2Q9NP81 518 aaKnown RBP16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 GPATCH2LQ9NWQ4 482 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 OGFRQ9NZT2 677 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 RWDD2AQ9UIY3 292 aa16.24■□□□□ 0.19
NECTIN1-202ENST00000340882 APCP25054 2843 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 HTRA2O43464 458 aaPredicted RBP16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 KRT3P12035 628 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 MIIPQ5JXC2 388 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 IYDQ6PHW0 289 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 CT55Q8WUE5 264 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 PDCD6IPQ8WUM4 868 aaKnown RBP16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 SCAMP4Q969E2 229 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 PCDHB18PQ96TA0 734 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 ABCG8Q9H221 673 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 MLXIPLQ9NP71 852 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 KCND3Q9UK17 655 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 PCDHGA6Q9Y5G7 932 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 CROCCQ5TZA2 2017 aa16.23■□□□□ 0.19
NECTIN1-202ENST00000340882 MN1Q10571 1320 aaPredicted RBP16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 A6NCN8 305 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 ARHGAP42A6NI28 874 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 F8VZ95 297 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 FGF10O15520 208 aaPredicted RBP16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 NDUFA10O95299 355 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 ANKRD34CP0C6C1 535 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 GPR1P46091 355 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 SEPHS1P49903 392 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 TPI1P60174 286 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 SLC10A7Q0GE19 358 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 TRAF2Q12933 501 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 DNASE1L3Q13609 305 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 CA9Q16790 459 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 NPWQ8N729 165 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 SPOCK2Q92563 424 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 STAMBPL1Q96FJ0 436 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 C9orf72Q96LT7 481 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 OR6C1Q96RD1 312 aa16.22■□□□□ 0.19
NECTIN1-202ENST00000340882 DNAJC6O75061 913 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 TIAF1O95411 115 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 CPP00450 1065 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 C9P02748 559 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 UCHL3P15374 230 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 CTPS1P17812 591 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 ELAVL4P26378 380 aaKnown RBP16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 NOP2P46087 812 aaKnown RBP16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 PGDP52209 483 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 EPHA4P54764 986 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 AP1S1P61966 158 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 RPS18P62269 152 aaKnown RBP16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 DPTQ07507 201 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 MAN2A1Q16706 1144 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 ADAMTSL4Q6UY14 1074 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 CHST15Q7LFX5 561 aaPredicted RBP16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 LYSMD3Q7Z3D4 306 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 GALNT13Q8IUC8 556 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 RASGRP3Q8IV61 690 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 PGBD5Q8N414 524 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 C19orf60Q96EN9 201 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 SLC25A23Q9BV35 468 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 NDST4Q9H3R1 872 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 ACTL8Q9H568 366 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 SP110Q9HB58 689 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 KCTD5Q9NXV2 234 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 DONSONQ9NYP3 566 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 KIAA1468Q9P260 1216 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 KCNK6Q9Y257 313 aa16.21■□□□□ 0.19
NECTIN1-202ENST00000340882 PDZD2O15018 2839 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 DFFAO00273 331 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 INPP4BO15327 924 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 GFPT2O94808 682 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 ATP1A1P05023 1023 aaKnown RBP16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 UNGP13051 313 aaPredicted RBP16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 LEPRP48357 1165 aaKnown RBP16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 CCL11P51671 97 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 RIPPLY3P57055 190 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 RPL7AP62424 266 aaKnown RBP16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 CDR2Q01850 454 aa16.2■□□□□ 0.18
NECTIN1-202ENST00000340882 JMJD6Q6NYC1 403 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms