RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 NCSTNQ92542 709 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 BHMTQ93088 406 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 TPD52L3Q96J77 140 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 HNRNPABQ99729 332 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 TUBA8Q9NY65 449 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 GNPTGQ9UJJ9 305 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 PCDHGA7Q9Y5G6 932 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 ARAP2Q8WZ64 1704 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 LAMB1P07942 1786 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 PDZK1P1A8MUH7 402 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 RECQL5O94762 991 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 MYO1DO94832 1006 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 CYBBP04839 570 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 ALOX5P09917 674 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 HIST1H2AGP0C0S8 130 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 HOXB8P17481 243 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 HIST1H2ADP20671 130 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 IMPDH1P20839 514 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 GJA8P48165 433 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 DAOAP59103 153 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 PMS2P3Q13401 168 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 TUBB3Q13509 450 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 PAFAH1B3Q15102 231 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 OVOS1Q6IE37 1185 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 SZRD1Q7Z422 152 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 PNPT1Q8TCS8 783 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 HIST1H2AHQ96KK5 128 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 RPL10LQ96L21 214 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 MUS81Q96NY9 551 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 SEPT5Q99719 369 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 HIST1H2AJQ99878 128 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 H2AFJQ9BTM1 129 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 MUC3BQ9H195 1237 aa13.42□□□□□ -0.26
SEC23A-201ENST00000307712 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
SEC23A-201ENST00000307712 ZCWPW2A0A1B0GU75 182 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 MYBPHLA2RUH7 354 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 MLYCDO95822 493 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 ANGPTL1O95841 491 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 PGK1P00558 417 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 IDH2P48735 452 aaKnown RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 AIF1P55008 147 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 LILRA4P59901 499 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 DSC2Q02487 901 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 MAPRE1Q15691 268 aaKnown RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CCDC142Q17RM4 750 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 C6orf183Q5T699 404 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 GLT6D1Q7Z4J2 308 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 TAC4Q86UU9 113 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 GPR180Q86V85 440 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 KCNA7Q96RP8 456 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 FEM1AQ9BSK4 669 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 RMND5AQ9H871 391 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 POLR3HQ9Y535 204 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 PCDHGB5Q9Y5G0 923 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CLPXO76031 633 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 SOX6P35712 828 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 LCP2Q13094 533 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 KRR1Q13601 381 aaKnown RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 DAG1Q14118 895 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 INTS6LQ5JSJ4 861 aaKnown RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 TSTD2Q5T7W7 516 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 UGT3A1Q6NUS8 523 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 RNF111Q6ZNA4 994 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 EXOC2Q96KP1 924 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CLPBQ9H078 707 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 SNX8Q9Y5X2 465 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 PTGDR2Q9Y5Y4 395 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 NDUFS2O75306 463 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 PORP16435 677 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CCNCP24863 283 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 INHBEP58166 350 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CLHC1Q8NHS4 586 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 SPPL2AQ8TCT8 520 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 SLC47A1Q96FL8 570 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 SLC9A7Q96T83 725 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 MLPHQ9BV36 600 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 ABCG8Q9H221 673 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 VTA1Q9NP79 307 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CCM2LQ9NUG4 571 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CYP2C18P33260 490 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 S100A3P33764 101 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 HALP42357 657 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 PIGFQ07326 219 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 DNASE1L3Q13609 305 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 TRIP4Q15650 581 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 SLC15A3Q8IY34 581 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 TMBIM1Q969X1 311 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 POLR1EQ9GZS1 481 aaKnown RBP13.41□□□□□ -0.26
SEC23A-201ENST00000307712 ZNHIT2Q9UHR6 403 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CPA4Q9UI42 421 aa13.41□□□□□ -0.26
SEC23A-201ENST00000307712 CYP4F2P78329 520 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms