RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 TUBGCP3Q96CW5 907 aa11.5□□□□□ -0.57
CCND1-201ENST00000227507 FCRL3Q96P31 734 aaPredicted RBP11.5□□□□□ -0.57
CCND1-201ENST00000227507 MRPS23Q9Y3D9 190 aaKnown RBP11.5□□□□□ -0.57
CCND1-201ENST00000227507 TNS1Q9HBL0 1735 aaKnown RBP11.5□□□□□ -0.57
CCND1-201ENST00000227507 TCRBV5S1A1TA0A578 114 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 NOTOA8MTQ0 251 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 PSMD11O00231 422 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 MFSD11O43934 449 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 DEAF1O75398 565 aaPredicted RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 EDN1P05305 212 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 GPD2P43304 727 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 LIMK2P53671 638 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TUBA4AP68366 448 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 MRPS15P82914 257 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 TWF1Q12792 350 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 PPP1R8Q12972 351 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 LRP8Q14114 963 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 DDR2Q16832 855 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 CARNMT1Q8N4J0 409 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 PSMA8Q8TAA3 256 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 NACC2Q96BF6 587 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 SLC25A23Q9BV35 468 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 LHX5Q9H2C1 402 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 THG1LQ9NWX6 298 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 GIMAP2Q9UG22 337 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 INSL6Q9Y581 213 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TCAF2A6NFQ2 919 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ZNF195O14628 629 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 GCATO75600 419 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 MYO1DO94832 1006 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TYMPP19971 482 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TCEA1P23193 301 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 INTS6LQ5JSJ4 861 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 CCDC185Q8N715 623 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ATAD1Q8NBU5 361 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 STARD8Q92502 1023 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ZNF597Q96LX8 424 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ACBD6Q9BR61 282 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 CORINQ9Y5Q5 1042 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 APOA4P06727 396 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ELK4P28324 431 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ADAM17P78536 824 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 MOGQ16653 247 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 SPANXN3Q5MJ09 141 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 CRTC3Q6UUV7 619 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ZNF534Q76KX8 674 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 PNPLA1Q8N8W4 532 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TRPC4APQ8TEL6 797 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 EHD1Q9H4M9 534 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ARIH1Q9Y4X5 557 aaPredicted RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 G3V2L1 256 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 OR4Q2P0C623 313 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TTKP33981 857 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 ALDH3B2P48448 385 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TXNL4AP83876 142 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 SDHAF4Q5VUM1 108 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 NIPAL1Q6NVV3 410 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TP53INP2Q8IXH6 220 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 TBC1D15Q8TC07 691 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 CELF6Q96J87 481 aaKnown RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 CINPQ9BW66 212 aaPredicted RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 HMG20AQ9NP66 347 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 IFT80Q9P2H3 777 aaPredicted RBP11.49□□□□□ -0.57
CCND1-201ENST00000227507 NOX1Q9Y5S8 564 aa11.49□□□□□ -0.57
CCND1-201ENST00000227507 LINC00854A0A1B0GVQ3 168 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 KRBA1A5PL33 1030 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 H2AFYO75367 372 aaKnown RBP11.48□□□□□ -0.57
CCND1-201ENST00000227507 PMPCBO75439 489 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 MFN2O95140 757 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 LDLRP01130 860 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 CHRM3P20309 590 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 ATP6V1B2P21281 511 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 TSTA3Q13630 321 aaPredicted RBP11.48□□□□□ -0.57
CCND1-201ENST00000227507 FBXO48Q5FWF7 155 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 TIGD7Q6NT04 549 aaPredicted RBP11.48□□□□□ -0.57
CCND1-201ENST00000227507 LYSMD3Q7Z3D4 306 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 CARM1Q86X55 608 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 CCDC103Q8IW40 242 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 DENND6AQ8IWF6 608 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 SFRP1Q8N474 314 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 FBXO22Q8NEZ5 403 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 HDAC10Q969S8 669 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 MCRS1Q96EZ8 462 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 ZNF670Q9BS34 389 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 R3HDMLQ9H3Y0 253 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 PNMA8BQ9ULN7 279 aaPredicted RBP11.48□□□□□ -0.57
CCND1-201ENST00000227507 C9IYK1 514 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 GRID2O43424 1007 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 DLX3O60479 287 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 RSL1D1O76021 490 aaKnown RBP11.48□□□□□ -0.57
CCND1-201ENST00000227507 BMP10O95393 424 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 SNAP29O95721 258 aa11.48□□□□□ -0.57
CCND1-201ENST00000227507 ZNF135P52742 658 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms