RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 GPR158Q5T848 1215 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 FUT10Q6P4F1 479 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 UBE2R2Q712K3 238 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 LDB1Q86U70 411 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 NPAS2Q99743 824 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ARIH1Q9Y4X5 557 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 PCDHB1Q9Y5F3 818 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 GMPPBQ9Y5P6 360 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 MYO9BQ13459 2157 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 A0A0J9YYE9 177 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ISM1B1AKI9 464 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 NEDD8-MDP1E9PL57 170 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 MATN3O15232 486 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ACSL4O60488 711 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 NR2F1P10589 423 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 PBX3P40426 434 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 CDC42P60953 191 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 COPZ1P61923 177 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ATP1A4Q13733 1029 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 AP5B1Q2VPB7 878 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 PDZK1Q5T2W1 519 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 EIF3MQ7L2H7 374 aaKnown RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 RASAL3Q86YV0 1011 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 CYP4X1Q8N118 509 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 CAMKK1Q8N5S9 505 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 FAM13CQ8NE31 585 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 OR8D1Q8WZ84 308 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ABCG8Q9H221 673 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 SERHL2Q9H4I8 314 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 SERHLQ9NQF3 203 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 FETUBQ9UGM5 382 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 A0A1B0GVM2 712 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TCAF2A6NFQ2 919 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 KCNU1A8MYU2 1149 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 PLIN3O60664 434 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 CST1P01037 141 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TSPAN19P0C672 248 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 STX4Q12846 297 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TRAF3Q13114 568 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 ESRP1Q6NXG1 681 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 NEK10Q6ZWH5 1172 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 OR7D4Q8NG98 312 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 PHF10Q8WUB8 498 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 NELL1Q92832 810 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 EMID1Q96A84 441 aaPredicted RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TCF12Q99081 682 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 RTKNQ9BST9 563 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TXLNGYQ9BZA5 131 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 NUAK2Q9H093 628 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 DTLQ9NZJ0 730 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 DEC1Q9P2X7 70 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 ANGPT4Q9Y264 503 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 PCDHGC4Q9Y5F7 938 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 GLYATL1P3A0A0U1RQE8 302 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 ITGA1P56199 1179 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TRIM40Q6P9F5 258 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 ABRAXAS1Q6UWZ7 409 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 R3HCC1LQ7Z5L2 792 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 FAM20CQ8IXL6 584 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 RBM15BQ8NDT2 890 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 REXO5Q96IC2 774 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 VPS35Q96QK1 796 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 GPR21Q99679 349 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 MYOCQ99972 504 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 SPATA5L1Q9BVQ7 753 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 KLHL1Q9NR64 748 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
NOD1-201ENST00000222823 DAPK2Q9UIK4 370 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 MSRAQ9UJ68 235 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 WFS1O76024 890 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 FYNP06241 537 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 ITGA2P17301 1181 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 RPL5P46777 297 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 GNPDA1P46926 289 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 NAIF1Q69YI7 327 aaPredicted RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 LINGO4Q6UY18 593 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 HEXDCQ8WVB3 486 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 HOPXQ9BPY8 73 aaPredicted RBP11.48□□□□□ -0.57
NOD1-201ENST00000222823 SLC39A8Q9C0K1 460 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 MAGEH1Q9H213 219 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 KCTD5Q9NXV2 234 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TBC1D14Q9P2M4 693 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 TCAF1Q9Y4C2 921 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 DLEC1Q9Y238 1755 aa11.48□□□□□ -0.57
NOD1-201ENST00000222823 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 CENPXA8MT69 81 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 CCL22O00626 93 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 SYN3O14994 580 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 STX11O75558 287 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms