RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Dpf2Q61103 391 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Dyrk1aQ61214 763 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mef2dQ63943 514 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Kiaa1841Q68FF0 718 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Aggf1Q7TN31 711 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 ZfatQ7TS63 1237 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Kirrel1Q80W68 789 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Srrm3Q80WV7 648 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 AW551984Q8BGF0 804 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfm5Q8BU90 496 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Akr7a2Q8CG76 367 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fndc5Q8K4Z2 209 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 McmbpQ8R3C0 642 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn1r42Q8VBS7 329 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cacng8Q8VHW2 423 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn1r43Q8VIC9 329 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Depdc7Q91WS7 511 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Chid1Q922Q9 393 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Reep3Q99KK1 254 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 CenpmQ9CQA0 180 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Echdc1Q9D9V3 322 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 HemgnQ9ERZ0 503 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Abhd2Q9QXM0 425 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 C1qtnf1Q9QXP7 281 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ruvbl2Q9WTM5 463 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Hey1Q9WV93 299 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Svs3aF2Z472 265 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PdgfrbP05622 1098 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Aldh2P47738 519 aaKnown RBP9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PrkcbP68404 671 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Bcl2l2P70345 193 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gas1Q01721 343 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Adrbk2Q3UYH7 688 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Btg1-ps1Q3V0S2 161 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Btg1-ps2Q3V0X0 161 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lcn4Q62472 185 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lix1Q6P566 282 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MogsQ80UM7 834 aaKnown RBP9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cyp4f39Q8BGU0 532 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 R3hcc1lQ8BJM3 775 aaKnown RBP9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fbxo44Q8BK26 255 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zdhhc14Q8BQQ1 489 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q8CDS7 251 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rnf219Q8K2Y0 722 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MINDY3Q9CV28 444 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Atxn3Q9CVD2 355 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Spesp1Q9D5A0 399 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tnfrsf22Q9ER62 198 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Nek7Q9ES74 302 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PalmdQ9JHU2 551 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ddx60E9PZQ1 1711 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lbhd1A0A087WPA0 259 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Itga8A2ARA8 1062 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Adamts6D3Z1A5 1117 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Adamts14E9PX39 1209 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm340F6RGI3 1242 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Maml2F6U238 1170 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn2r65G3X931 845 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm21897J3KMP5 500 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Prl4a1O35256 227 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sap30O88574 220 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Psmd3P14685 530 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 YwhaeP62259 255 aaKnown RBP9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Thumpd3P97770 505 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Llgl2Q3TJ91 1027 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 P2rx5Q3UYI1 455 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Srrm1Q52KI8 946 aaKnown RBP9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Znrf3Q5SSZ7 913 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sema3cQ62181 751 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PtprcapQ64697 197 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tmem151bQ68FE7 561 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q6GQU0 248 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1225Q7TR01 311 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1036Q7TR85 310 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lrrc8dQ8BGR2 859 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cdh7Q8BM92 785 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rfx6Q8C7R7 927 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Arhgap18Q8K0Q5 663 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Dync2li1Q8K0T2 351 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Abhd11Q8K4F5 307 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q9D2X8 372 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sept12Q9D451 317 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Hormad1Q9D5T7 392 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cyp27a1Q9DBG1 533 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Enpp5Q9EQG7 477 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ubqln2Q9QZM0 638 aa9.05□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1338A2ACY7 313 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1098A2AVB0 315 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Stx1aO35526 288 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slc25a17O70579 307 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Klc2O88448 599 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Casp8O89110 480 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 P01896 185 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ugt2b17P17717 530 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cd82P40237 266 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Pon1P52430 355 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Adamts1P97857 968 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Arhgap45Q3TBD2 1116 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ifit1bl2Q3U687 466 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Eif4e1bQ3UTA9 244 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms