RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MFSD10Q14728 455 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 RAB39AQ14964 217 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 C16orf72Q14CZ0 275 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 CCNYL2Q5T2Q4 361 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PRR23BQ6ZRT6 265 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PTGR2Q8N8N7 351 aaPredicted RBP13.22□□□□□ -0.29
VRK3-209ENST00000594948 SNX31Q8N9S9 440 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PDPRQ8NCN5 879 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 FAM110BQ8TC76 370 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 TADA1Q96BN2 335 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PTERQ96BW5 349 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 THAP11Q96EK4 314 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 FCRL2Q96LA5 508 aaPredicted RBP13.22□□□□□ -0.29
VRK3-209ENST00000594948 C1orf74Q96LT6 269 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 NUSAP1Q9BXS6 441 aaKnown RBP13.22□□□□□ -0.29
VRK3-209ENST00000594948 MID1IP1Q9NPA3 183 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 RGS18Q9NS28 235 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 RIMKLBQ9ULI2 386 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 OAZ3Q9UMX2 235 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 CDC14AQ9UNH5 594 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 IQCA1LA6NCM1 817 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 EEDO75530 441 aaKnown RBP13.21□□□□□ -0.29
VRK3-209ENST00000594948 ATE1O95260 518 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 PAX3P23760 479 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 VARSP26640 1264 aaKnown RBP13.21□□□□□ -0.29
VRK3-209ENST00000594948 HTR1EP28566 365 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 RPS9P46781 194 aaKnown RBP13.21□□□□□ -0.29
VRK3-209ENST00000594948 GSK3BP49841 420 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 PMS2P3Q13401 168 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 TUBA3CQ13748 450 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 GRB7Q14451 532 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 MOGQ16653 247 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 VPS26BQ4G0F5 336 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 CYBRD1Q53TN4 286 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 TWF2Q6IBS0 349 aaKnown RBP13.21□□□□□ -0.29
VRK3-209ENST00000594948 FKBP9P1Q75LS8 142 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 DDIASQ8IXT1 998 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 UMODL1-AS1Q8N2C9 162 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 COX4I2Q96KJ9 171 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 ALG2Q9H553 416 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 GMIPQ9P107 970 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 EGFL7Q9UHF1 273 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 SFMBT1Q9UHJ3 866 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 POLG2Q9UHN1 485 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 HEMK1Q9Y5R4 338 aaPredicted RBP13.21□□□□□ -0.29
VRK3-209ENST00000594948 GPR45Q9Y5Y3 372 aa13.21□□□□□ -0.29
VRK3-209ENST00000594948 TDRD15B5MCY1 1934 aaKnown RBP13.21□□□□□ -0.29
VRK3-209ENST00000594948 E9PAM4 449 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 MAGEB3O15480 346 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 NOL3O60936 208 aaKnown RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 LDLRP01130 860 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 CYP11A1P05108 521 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 THP07101 528 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 ODC1P11926 461 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 OGNP20774 298 aaKnown RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 IGFBP6P24592 240 aaPredicted RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 OXTRP30559 389 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 PSEN2P49810 448 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TMBIM6P55061 237 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 RCAN2Q14206 197 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 GRB14Q14449 540 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 RPS6KA2Q15349 733 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 PCSK7Q16549 785 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TEX26Q8N6G2 289 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 CYGBQ8WWM9 190 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 ATOH8Q96SQ7 321 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 PKMYT1Q99640 499 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 RTP3Q9BQQ7 232 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TINF2Q9BSI4 451 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 CCDC68Q9H2F9 335 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TUBB1Q9H4B7 451 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 POLR1BQ9H9Y6 1135 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 IL1RL2Q9HB29 575 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 PFDN4Q9NQP4 134 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
VRK3-209ENST00000594948 FAM149AA5PLN7 773 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 UBXN8O00124 270 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 EI24O14681 340 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 MT-CO1P00395 513 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 MMP2P08253 660 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 SLC2A3P11169 496 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 MTHFD2P13995 350 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 HGFP14210 728 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 TSPAN8P19075 237 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 UGT1A6P19224 532 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 CLCNKBP51801 687 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 KCNK10P57789 538 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 LCP2Q13094 533 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 NFYCQ13952 458 aa13.2□□□□□ -0.3
VRK3-209ENST00000594948 BTG3Q14201 252 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms