RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 RPS27LQ71UM5 84 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 MDGA1Q8NFP4 955 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 C19orf60Q96EN9 201 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 NPAS2Q99743 824 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 TNFRSF12AQ9NP84 129 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 RNF112Q9ULX5 631 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 COMMD10Q9Y6G5 202 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 ANKRD66B4E2M5 251 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 H3BNX3 289 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 VPS26AO75436 327 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 UPP2O95045 317 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 F11P03951 625 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 SOD2P04179 222 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 IRF1P10914 325 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 PSMD8P48556 350 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 PSME3P61289 254 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 PLD1Q13393 1074 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 CEACAM7Q14002 265 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 PFKFB4Q16877 469 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 INO80DQ53TQ3 878 aaPredicted RBP19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 RNF111Q6ZNA4 994 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 C16orf59Q7L2K0 433 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 GATA6Q92908 595 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 TMA16Q96EY4 203 aaKnown RBP19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 EXOC2Q96KP1 924 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 EPS15L1Q9UBC2 864 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 STOML2Q9UJZ1 356 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 YIPF1Q9Y548 306 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 MICAL3Q7RTP6 2002 aa19.1■□□□□ 0.65
PRKCSH-209ENST00000589838 TYW5A2RUC4 315 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 UBXN8O00124 270 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 AZIN1O14977 448 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 STX7O15400 261 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 BCAS2O75934 225 aaPredicted RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 XRCC1P18887 633 aaPredicted RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SGSHP51688 502 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 PKNOX1P55347 436 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 CCL23P55773 120 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 TRIP10Q15642 601 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 CLEC6AQ6EIG7 209 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 PAQR3Q6TCH7 311 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 PQLC1Q8N2U9 271 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 FBXO39Q8N4B4 442 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 CATSPER1Q8NEC5 780 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SH3RF2Q8TEC5 729 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 UCMAQ8WVF2 138 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 USP13Q92995 863 aaPredicted RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 VN1R3Q9BXE9 311 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 RNF38Q9H0F5 515 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 UNC93B1Q9H1C4 597 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 MID1IP1Q9NPA3 183 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SPATS2LQ9NUQ6 558 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SARDHQ9UL12 918 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SUPT3HB4E1H0 165 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 H0Y626 953 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 KIF3CO14782 793 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 VPS4BO75351 444 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SUPT3HO75486 399 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 TMCC1O94876 653 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 CDK14O94921 469 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 C1RP00736 705 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 MTHFD2P13995 350 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 PKMP14618 531 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 CLCN4P51793 760 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 SH3BP2P78314 561 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 IKBKEQ14164 716 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 GEN1Q17RS7 908 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 UGT3A2Q3SY77 523 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 CXorf57Q6NSI4 855 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 NCEH1Q6PIU2 408 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 HACD2Q6Y1H2 254 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 TOP1MTQ969P6 601 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 NSMCE3Q96MG7 304 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 PCDHGC4Q9Y5F7 938 aa19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 OAS3Q9Y6K5 1087 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-209ENST00000589838 MBL2P11226 248 aaPredicted RBP19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 PPP1R3AQ16821 1122 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 PTPRNQ16849 979 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 SPOUT1Q5T280 376 aaKnown RBP19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 ANKS6Q68DC2 871 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 REP15Q6BDI9 236 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 TXNDC11Q6PKC3 985 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 SPNS2Q8IVW8 549 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 HJURPQ8NCD3 748 aaPredicted RBP19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 SPDL1Q96EA4 605 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 ADA2Q9NZK5 511 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 CCDC167Q9P0B6 97 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 DLGAP2Q9P1A6 1054 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 PACSIN3Q9UKS6 424 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 FAM50BQ9Y247 325 aa19.08■□□□□ 0.65
PRKCSH-209ENST00000589838 ANAPC1Q9H1A4 1944 aa19.08■□□□□ 0.64
PRKCSH-209ENST00000589838 DPPA5A6NC42 116 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 EIF4E1BA6NMX2 242 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 H3BMM5 538 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 STX16-NPEPL1H3BU86 382 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 H7C0S8 307 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 STX16O14662 325 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 TBL1XO60907 577 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 TSPAN8P19075 237 aa19.07■□□□□ 0.64
PRKCSH-209ENST00000589838 MC4RP32245 332 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms