RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RP9Q8TA86 221 aaKnown RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 LNX1Q8TBB1 728 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 XAGE5Q8WWM1 108 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 RLN3Q8WXF3 142 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 DNASE1L2Q92874 299 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 RILPL2Q969X0 211 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 ERLEC1Q96DZ1 483 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 COQ10AQ96MF6 247 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PRR25Q96S07 402 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 TWSG1Q9GZX9 223 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 VPS16Q9H269 839 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 RNF41Q9H4P4 317 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 SLC32A1Q9H598 525 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 CLMPQ9H6B4 373 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 RRN3Q9NYV6 651 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 SUCLA2Q9P2R7 463 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 ZNF69Q9UC07 566 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 C19orf53Q9UNZ5 99 aaPredicted RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 CNTN6Q9UQ52 1028 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 REXO2Q9Y3B8 237 aaKnown RBP5.68□□□□□ -1.5
SF3B3-214ENST00000572365 PCDHGA5Q9Y5G8 931 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 DOCK9Q9BZ29 2069 aa5.68□□□□□ -1.5
SF3B3-214ENST00000572365 COL1A2P08123 1366 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 UBR5O95071 2799 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 TRABD2BA6NFA1 517 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 B9A039 149 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 FAM86B1E9PN63 330 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 H0Y3Z8 333 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 DYNC1I1O14576 645 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 MAGEB2O15479 319 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 CTIFO43310 598 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 CHMP2AO43633 222 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 SH3BP5O60239 455 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 RHOBTB1O94844 696 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 CER1O95813 267 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 EGFP01133 1207 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 HNRNPA1P09651 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 FAM86B2P0C5J1 330 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 HKR1P10072 659 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 PTPN2P17706 415 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 ENGP17813 658 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 HOXA11P31270 313 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 DGKQP52824 942 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 PRKAA2P54646 552 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 TEAD2Q15562 447 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 CEP55Q53EZ4 464 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 STXBP5Q5T5C0 1151 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 KAZNQ674X7 775 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 GRHL2Q6ISB3 625 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 CCDC70Q6NSX1 233 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 CCNI2Q6ZMN8 369 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 DPY19L3Q6ZPD9 716 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 SPRED1Q7Z699 444 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 MRPL10Q7Z7H8 261 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 SRBD1Q8N5C6 995 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 LINC00476Q8WZB0 136 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 TFAP2BQ92481 460 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 USP13Q92995 863 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 RRP36Q96EU6 259 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 MBOAT7Q96N66 472 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 TRAPPC9Q96Q05 1148 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 NAP1L4Q99733 375 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 DPCDQ9BVM2 203 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 TRIM4Q9C037 500 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 SEMA4CQ9C0C4 833 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 SLITRK6Q9H5Y7 841 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 SEPSECSQ9HD40 501 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 KCNK9Q9NPC2 374 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 GDE1Q9NZC3 331 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 PDP2Q9P2J9 529 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 ADAM28Q9UKQ2 775 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 NFASCO94856 1347 aa5.67□□□□□ -1.5
SF3B3-214ENST00000572365 TNRC6BQ9UPQ9 1833 aaKnown RBP5.67□□□□□ -1.5
SF3B3-214ENST00000572365 NOTCH2Q04721 2471 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 AHCTF1Q8WYP5 2266 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 EFCAB8A8MWE9 144 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PRRG1O14668 218 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 CLGNO14967 610 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PPP6R2O75170 966 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 MOSPD3O75425 235 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 SEC24AO95486 1093 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 TK1P04183 234 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 DLDP09622 509 aaKnown RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 NR2F6P10588 404 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 DRD1P21728 446 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 SFPQP23246 707 aaKnown RBP eCLIP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 MCM5P33992 734 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PTGER3P43115 390 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 GSTM5P46439 218 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 SLC26A2P50443 739 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 TPTEP56180 551 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 CLDN6P56747 220 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 E2F1Q01094 437 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PRKCEQ02156 737 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 DSC1Q08554 894 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 CUL4BQ13620 913 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 TRIP6Q15654 476 aaKnown RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PLAC9Q5JTB6 97 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms