RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 RPL9P32969 192 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 TSPY1Q01534 308 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 GRB7Q14451 532 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF829Q3KNS6 432 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 UGT3A2Q3SY77 523 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CCNYL2Q5T2Q4 361 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 KANK2Q63ZY3 851 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 Q6ZNX1 250 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 PIM3Q86V86 326 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 OR13J1Q8NGT2 312 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF419Q96HQ0 510 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 ACBD6Q9BR61 282 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SMOC2Q9H3U7 446 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 MPP6Q9NZW5 540 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 C17orf102A2RUQ5 167 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 CASTOR2A6NHX0 329 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 C9JVG2 144 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 MAGEB3O15480 346 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 LINC00032P0C843 101 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 RPL10P27635 214 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 GSK3BP49841 420 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 EEFSECP57772 596 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 LIPEQ05469 1076 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 LCP2Q13094 533 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 ANKS6Q68DC2 871 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 THEM5Q8N1Q8 247 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 FBXO39Q8N4B4 442 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 DNAJB14Q8TBM8 379 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 FBXL20Q96IG2 436 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 ING2Q9H160 280 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 SYTL2Q9HCH5 934 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 LEF1Q9UJU2 399 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 BTRCQ9Y297 605 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 MRPL42Q9Y6G3 142 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 UBXN8O00124 270 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 BAIAP3O94812 1187 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 DDNO94850 711 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 SIX3O95343 332 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 IGLV3-25P01717 112 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 RFC2P35250 354 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 ETFBP38117 255 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 MAXP61244 160 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 NAA20P61599 178 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 RAB39AQ14964 217 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 NEDD8Q15843 81 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 MANEALQ5VSG8 457 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 BLOC1S3Q6QNY0 202 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 CYHR1Q6ZMK1 362 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 KCTD8Q6ZWB6 473 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 OFCC1Q8IZS5 231 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 PTERQ96BW5 349 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 SLC10A4Q96EP9 437 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 SERPINB11Q96P15 392 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 TFB2MQ9H5Q4 396 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 POPDC3Q9HBV1 291 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 SPON1Q9HCB6 807 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 GIMAP2Q9UG22 337 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 RNF112Q9ULX5 631 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 NEU3Q9UQ49 428 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 PDCD11Q14690 1871 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 A0A1W2PP18 115 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 CCL22O00626 93 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF12P17014 697 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 FDXRP22570 491 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 IGFBP6P24592 240 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 KCNC1P48547 511 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 TPD52P55327 224 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 YWHAHQ04917 246 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 FUT11Q495W5 492 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 IL31Q6EBC2 164 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 GRAMD4Q6IC98 578 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 LYSMD3Q7Z3D4 306 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 PROSER1Q86XN7 944 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 STAG3L4Q8TBR4 150 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 COX4I2Q96KJ9 171 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 PLEKHG4BQ96PX9 1271 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 RPF2Q9H7B2 306 aaKnown RBP10.73□□□□□ -0.69
CCDC40-207ENST00000572253 POLG2Q9UHN1 485 aa10.73□□□□□ -0.69
CCDC40-207ENST00000572253 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 CCDC154A6NI56 674 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 H3BMQ9 156 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 FXYD1O00168 92 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 CD3EAPO15446 510 aaKnown RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ZSCAN9O15535 394 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SNX2O60749 519 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ESRRBO95718 433 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 DCKP27707 260 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 OXTRP30559 389 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 DSC2Q02487 901 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 PMS2P3Q13401 168 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TMEM207Q6UWW9 146 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 RHEBL1Q8TAI7 183 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 FAM110BQ8TC76 370 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SDCCAG3Q96C92 435 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 COG8Q96MW5 612 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SEZ6LQ9BYH1 1024 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms