RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 COL12A1Q99715 3063 aa15.52■□□□□ 0.07
LINC01220-201ENST00000558575 PLXNA2O75051 1894 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 TEX51A0A1B0GUA7 166 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 CAPN8A6NHC0 703 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 PRAMEF26H0Y7S4 382 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 H0Y8X5 98 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 FLRT2O43155 660 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 IFNB1P01574 187 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 PIRTP0C851 137 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 CA4P22748 312 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 NUDT1P36639 197 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 COILP38432 576 aaPredicted RBP15.51■□□□□ 0.07
LINC01220-201ENST00000558575 EPHB1P54762 984 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 CLDN2P57739 230 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 SGCGQ13326 291 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
LINC01220-201ENST00000558575 SPARCL1Q14515 664 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 AGERQ15109 404 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 WSCD2Q2TBF2 565 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 HLA-BQ31612 363 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 CCDC157Q569K6 752 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 SIRPB2Q5JXA9 342 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 NAPEPLDQ6IQ20 393 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 DENND5AQ6IQ26 1287 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 DHRS13Q6UX07 377 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 ARHGEF18Q6ZSZ5 1173 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 USP45Q70EL2 814 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 TP53I13Q8NBR0 393 aaPredicted RBP15.51■□□□□ 0.07
LINC01220-201ENST00000558575 MAGOHBQ96A72 148 aaKnown RBP15.51■□□□□ 0.07
LINC01220-201ENST00000558575 CAPZA3Q96KX2 299 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 ETNK1Q9HBU6 452 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 NEU2Q9Y3R4 380 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 SPO11Q9Y5K1 396 aa15.51■□□□□ 0.07
LINC01220-201ENST00000558575 A0A1B0GVT2 93 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 POM121BA6NF01 834 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 ANXA9O76027 345 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 RECQL5O94762 991 aaPredicted RBP15.5■□□□□ 0.07
LINC01220-201ENST00000558575 CLDN7O95471 211 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 CER1O95813 267 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 CYP2A6P11509 494 aaPredicted RBP15.5■□□□□ 0.07
LINC01220-201ENST00000558575 HNRNPA2B1P22626 353 aaKnown RBP15.5■□□□□ 0.07
LINC01220-201ENST00000558575 CASQ1P31415 396 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 GRIA4P48058 902 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 GEMP55040 296 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 CLDN6P56747 220 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 LRRC66Q68CR7 880 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 GCNT7Q6ZNI0 430 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 LRRC69Q6ZNQ3 347 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 GPR155Q7Z3F1 870 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 TECPR1Q7Z6L1 1165 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 ZSCAN30Q86W11 494 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 PELI3Q8N2H9 469 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 SLC25A41Q8N5S1 370 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 ATL2Q8NHH9 583 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 IFT43Q96FT9 208 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 NAP1L3Q99457 506 aaPredicted RBP15.5■□□□□ 0.07
LINC01220-201ENST00000558575 APOL2Q9BQE5 337 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 FICDQ9BVA6 458 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 ADGRE3Q9BY15 652 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 PCDHGB2Q9Y5G2 931 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 HS3ST3A1Q9Y663 406 aa15.5■□□□□ 0.07
LINC01220-201ENST00000558575 AURKAO14965 403 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 VILLO15195 856 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 LZTS3O60299 673 aaPredicted RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 USP12O75317 370 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 C1SP09871 688 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 ELFN1P0C7U0 828 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 CD38P28907 300 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 AKT2P31751 481 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 IGFALSP35858 605 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 AFF3P51826 1226 aaKnown RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 STC1P52823 247 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 SRSF1Q07955 248 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 PRPSAP1Q14558 356 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 STAT4Q14765 748 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 SLC1A5Q15758 541 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 KIF19Q2TAC6 998 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 Q6ZVL8 140 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 ABI3BPQ7Z7G0 1075 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 SPATS2Q86XZ4 545 aaKnown RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 NDUFAF2Q8N183 169 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 MFSD2AQ8NA29 543 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 FUBP1Q96AE4 644 aaKnown RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 NXPE2Q96DL1 559 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 TRIM44Q96DX7 344 aaPredicted RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 C16orf45Q96MC5 204 aaPredicted RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 SEMA4CQ9C0C4 833 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 MAGEE1Q9HCI5 957 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 AASDHPPTQ9NRN7 309 aa15.49■□□□□ 0.07
LINC01220-201ENST00000558575 AAR2Q9Y312 384 aaKnown RBP15.49■□□□□ 0.07
LINC01220-201ENST00000558575 PHF2O75151 1096 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 ETV3P41162 512 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 ACOX1Q15067 660 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 TRIP13Q15645 432 aaPredicted RBP15.48■□□□□ 0.07
LINC01220-201ENST00000558575 TPRG1LQ5T0D9 272 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 DENND2CQ68D51 928 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 CCDC137Q6PK04 289 aaKnown RBP15.48■□□□□ 0.07
LINC01220-201ENST00000558575 LYSMD3Q7Z3D4 306 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 TMC3Q7Z5M5 1100 aa15.48■□□□□ 0.07
LINC01220-201ENST00000558575 FAM181AQ8N9Y4 354 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms