RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PADI1Q9ULC6 663 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 SUFUQ9UMX1 484 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 MRPS18BQ9Y676 258 aaKnown RBP5.17□□□□□ -1.58
SPG11-208ENST00000558155 FLNCQ14315 2725 aa5.17□□□□□ -1.58
SPG11-208ENST00000558155 TEX15Q9BXT5 2789 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 A0A1W2PQ67 120 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 A6NCN8 305 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 A8MX80 341 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 TCP11X1B4DZS4 312 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FAM72CH0Y354 149 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 LRCH4O75427 683 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 CREG1O75629 220 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 KRT38O76015 456 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 CLDN1O95832 211 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 MT-ND3P03897 115 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FUCA1P04066 466 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 IVLP07476 585 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PON1P27169 355 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 EPHB2P29323 1055 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 SDC4P31431 198 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 CDH5P33151 784 aaPredicted RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 LEPRP48357 1165 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 CCL11P51671 97 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FOXM1Q08050 763 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 NSUN2Q08J23 767 aaKnown RBP eCLIP5.16□□□□□ -1.58
SPG11-208ENST00000558155 RALGDSQ12967 914 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 SEMA5AQ13591 1074 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PKP1Q13835 747 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 IL11RAQ14626 422 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 INPP5JQ15735 1006 aaPredicted RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 CDO1Q16878 200 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 EXOC3L4Q17RC7 722 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PARP15Q460N3 678 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 NADK2Q4G0N4 442 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FAM72AQ5TYM5 149 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 MANEALQ5VSG8 457 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 C1QL3Q5VWW1 255 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FAM72DQ6L9T8 149 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 STRADAQ7RTN6 431 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 SLFN11Q7Z7L1 901 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PHLDB2Q86SQ0 1253 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 SLC9B2Q86UD5 537 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FAM72BQ86X60 149 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 HPS6Q86YV9 775 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PLXDC1Q8IUK5 500 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 RASGRP3Q8IV61 690 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 HSCBQ8IWL3 235 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 FMR1NBQ8N0W7 255 aaPredicted RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 RTL3Q8N8U3 475 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 RXFP2Q8WXD0 754 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 THAP4Q8WY91 577 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 NUS1Q96E22 293 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 STAMBPL1Q96FJ0 436 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 EXOC2Q96KP1 924 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 C5orf34Q96MH7 638 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 FRMD8Q9BZ67 464 aaPredicted RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 ULBP3Q9BZM4 244 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 KLC2Q9H0B6 622 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 EPB41L1Q9H4G0 881 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 NOL6Q9H6R4 1146 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 RUBCNLQ9H714 662 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 APMAPQ9HDC9 416 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 SLAMF7Q9NQ25 335 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 ACSS2Q9NR19 701 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 MAP10Q9P2G4 905 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 DNAJC12Q9UKB3 198 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 CROTQ9UKG9 612 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PHTF1Q9UMS5 762 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 G3BP2Q9UN86 482 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 SLC5A6Q9Y289 635 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 SLC17A4Q9Y2C5 497 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 ZNF451Q9Y4E5 1061 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PCDHGB7Q9Y5F8 929 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 PCDHGA9Q9Y5G4 932 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 OAS3Q9Y6K5 1087 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 SHANK1Q9Y566 2161 aa5.16□□□□□ -1.58
SPG11-208ENST00000558155 TEP1Q99973 2627 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 TNRC6AQ8NDV7 1962 aaKnown RBP5.16□□□□□ -1.58
SPG11-208ENST00000558155 NBPF19A0A087WUL8 3843 aa5.15□□□□□ -1.58
SPG11-208ENST00000558155 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.15□□□□□ -1.59
SPG11-208ENST00000558155 TTC24A2A3L6 582 aaPredicted RBP5.15□□□□□ -1.59
SPG11-208ENST00000558155 GTPBP10A4D1E9 387 aaKnown RBP5.15□□□□□ -1.59
SPG11-208ENST00000558155 GOLGA6CA6NDK9 693 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 GOLGA6BA6NDN3 693 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 ARHGAP42A6NI28 874 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 OR5K4A6NMS3 321 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 WASH4PA8MWX3 477 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 C21orf140B9A014 251 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 HNRNPRO43390 633 aaKnown RBP5.15□□□□□ -1.59
SPG11-208ENST00000558155 DPM1O60762 260 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 PALMO75781 387 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 NDUFA10O95299 355 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 LSM8O95777 96 aaKnown RBP5.15□□□□□ -1.59
SPG11-208ENST00000558155 LDLRP01130 860 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 PDGFAP04085 211 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 PYGLP06737 847 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 FURINP09958 794 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 GOLGA6DP0CG33 693 aa5.15□□□□□ -1.59
SPG11-208ENST00000558155 RNF224P0DH78 156 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms