RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 UBE2IP63279 158 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 EEF1A1P68104 462 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 CCZ1BP86790 482 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 CCZ1P86791 482 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 BEX3Q00994 111 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 OCA2Q04671 838 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 EEF1A2Q05639 463 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 RNASELQ05823 741 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF33BQ06732 778 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ASPHQ12797 758 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 SGCGQ13326 291 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 TRPC3Q13507 836 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 COTL1Q14019 142 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ERV3-1Q14264 604 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF169Q14929 603 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 KPNB1Q14974 876 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ACAP2Q15057 778 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MAPKAPK3Q16644 382 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 GSTA3Q16772 222 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 RGS21Q2M5E4 152 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MAJINQ3KP22 176 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 C5orf22Q49AR2 442 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 CEP55Q53EZ4 464 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 XKR3Q5GH77 459 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 FAM47AQ5JRC9 791 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 RNF220Q5VTB9 566 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 EEF1A1P5Q5VTE0 462 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 NAA35Q5VZE5 725 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 LIN54Q6MZP7 749 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 WDR93Q6P2C0 686 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 C1orf228Q6PIY5 440 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 TRIM65Q6PJ69 517 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 SLC4A10Q6U841 1118 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PIK3AP1Q6ZUJ8 805 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MED25Q71SY5 747 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 COPS6Q7L5N1 327 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ADAMTSL2Q86TH1 951 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 COMTD1Q86VU5 262 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 HEATR4Q86WZ0 1026 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 GALNT13Q8IUC8 556 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 IFT20Q8IY31 132 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PM20D2Q8IYS1 436 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ZBED8Q8IZ13 594 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 NUP93Q8N1F7 819 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PPM1KQ8N3J5 372 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MYCBPAPQ8TBZ2 947 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 GANCQ8TET4 914 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 AGAP11Q8TF27 550 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF473Q8WTR7 871 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 TRIB2Q92519 343 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MFSD3Q96ES6 412 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PPP1R13BQ96KQ4 1090 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 AIFM3Q96NN9 605 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 USP28Q96RU2 1077 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 YME1L1Q96TA2 773 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 DDX50Q9BQ39 737 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 DUSP26Q9BV47 211 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 CINPQ9BW66 212 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ALOXE3Q9BYJ1 711 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 RHOBTB2Q9BYZ6 727 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 C6orf62Q9GZU0 229 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 XKR8Q9H6D3 395 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 AZI2Q9H6S1 392 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ATP13A3Q9H7F0 1226 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 TMEM206Q9H813 350 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 SP140LQ9H930 580 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 LY9Q9HBG7 655 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PALMDQ9NP74 551 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MRPL40Q9NQ50 206 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 DIABLOQ9NR28 239 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 TOPORSQ9NS56 1045 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ANKEF1Q9NU02 776 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 BLOC1S4Q9NUP1 217 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PTTG2Q9NZH5 202 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 DLGAP2Q9P1A6 1054 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 TSPYL4Q9UJ04 414 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ERVK-11Q9UQG0 969 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 AP3M1Q9Y2T2 418 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 NOC2LQ9Y3T9 749 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 CFAP54Q96N23 3096 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PRRC2BQ5JSZ5 2229 aaKnown RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ATRNL1Q5VV63 1379 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 KMT2BQ9UMN6 2715 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 XIRP2A4UGR9 3374 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 EPG5Q9HCE0 2579 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PLXNA3P51805 1871 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 C15orf38-AP3S2A0A0A6YYH1 394 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ARHGEF37A1IGU5 675 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SH3PXD2BA1X283 911 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 HEATR9A2RTY3 570 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CTAGE9A4FU28 777 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 VWA3AA6NCI4 1184 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ZSCAN5BA6NJL1 495 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 LRRC3CA6NJW4 275 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 USP27XA6NNY8 438 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TCP10L2B9ZVM9 353 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 J3KRW8 73 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 BTN3A1O00481 513 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SLC9A3R1O14745 358 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms