RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SRLQ86TD4 932 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 TTC7BQ86TV6 843 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 PARGQ86W56 976 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 TMPRSS12Q86WS5 348 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 CPNE8Q86YQ8 564 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 CAMK1DQ8IU85 385 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 PGBD5Q8N414 524 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 LZTR1Q8N653 840 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 FAM181AQ8N9Y4 354 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ZNF548Q8NEK5 533 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 MDM1Q8TC05 714 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 HNRNPLLQ8WVV9 542 aaKnown RBP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ZNF641Q96N77 438 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ZNF599Q96NL3 588 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 CSPG4P5Q96PW8 444 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 PSKH2Q96QS6 385 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 TUBGCP5Q96RT8 1024 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 DNAJC7Q99615 494 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 NUP85Q9BW27 656 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ZWILCHQ9H900 591 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ARNT2Q9HBZ2 717 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 PCDH18Q9HCL0 1135 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 MBNL1Q9NR56 388 aaKnown RBP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 NLGN3Q9NZ94 848 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 IPO11Q9UI26 975 aaKnown RBP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ANAPC7Q9UJX3 599 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 LUC7L2Q9Y383 392 aaKnown RBP6.69□□□□□ -1.34
TMEM116-208ENST00000549537 MYLKQ15746 1914 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 MGAQ8IWI9 3026 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 ATMQ13315 3056 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 PTPN13Q12923 2485 aa6.69□□□□□ -1.34
TMEM116-208ENST00000549537 CFAP69A5D8W1 941 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 TRABD2BA6NFA1 517 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 GOLGA6L19H0YKK7 550 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 H3BRJ5 948 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 K7ESM1 405 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 DFFAO00273 331 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 GSC2O15499 205 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 FFAR2O15552 330 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 DAPK3O43293 454 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 HTRA2O43464 458 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 MAFKO60675 156 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 PALMO75781 387 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 NEBLO76041 1014 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 TM7SF2O76062 418 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 MAP3K6O95382 1288 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CD48P09326 243 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CKMT1AP12532 417 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 NFKB1P19838 968 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 EIF4A3P38919 411 aaKnown RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 HNRNPKP61978 463 aaKnown RBP eCLIP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 YPEL5P62699 121 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 ELP6Q0PNE2 266 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 RALGDSQ12967 914 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 PDE1CQ14123 709 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 IRF4Q15306 451 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 ZRSR2Q15696 482 aaKnown RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 WSCD2Q2TBF2 565 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 SKOR2Q2VWA4 1001 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CCDC157Q569K6 752 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 PPP4R4Q6NUP7 873 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 BRAT1Q6PJG6 821 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 VPS36Q86VN1 386 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CACTIN-AS1Q8N1I8 211 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CXorf40AQ8TE69 158 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 HSPH1Q92598 858 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CCDC74AQ96AQ1 378 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 APOLD1Q96LR9 279 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 TBATAQ96M53 351 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 WRAP53Q9BUR4 548 aaKnown RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 PACSIN1Q9BY11 444 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 TCEAL2Q9H3H9 227 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CCDC86Q9H6F5 360 aaKnown RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 ATP13A3Q9H7F0 1226 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 SP110Q9HB58 689 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 DNAJC28Q9NX36 388 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 RCOR3Q9P2K3 495 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 IP6K2Q9UHH9 426 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 ATP8A1Q9Y2Q0 1164 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 COQ6Q9Y2Z9 468 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 CSNK1G3Q9Y6M4 447 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 TDRD6O60522 2096 aaKnown RBP6.68□□□□□ -1.34
TMEM116-208ENST00000549537 HECTD1Q9ULT8 2610 aa6.68□□□□□ -1.34
TMEM116-208ENST00000549537 COL6A6A6NMZ7 2263 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 MYO1FO00160 1098 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 TOR1BO14657 336 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 AQP9O43315 295 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 GCATO75600 419 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 PROSCO94903 275 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 PRKCGP05129 697 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 MYF5P13349 255 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 C6P13671 934 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 SERPINA4P29622 427 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 ARL4AP40617 200 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 LIG3P49916 1009 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 PEX5P50542 639 aa6.67□□□□□ -1.34
TMEM116-208ENST00000549537 TAS2R40P59535 323 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms