RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PATL1Q86TB9 770 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SERPINA11Q86U17 422 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 CHD1LQ86WJ1 897 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SUGP1Q8IWZ8 645 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 RPAP2Q8IXW5 612 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 LSM14AQ8ND56 463 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 TMEM163Q8TC26 289 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 PHOSPHO2Q8TCD6 241 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 ADAMTS15Q8TE58 950 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SLC35F5Q8WV83 523 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 DNAAF4Q8WXU2 420 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 HMCESQ96FZ2 354 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 GLT1D1Q96MS3 346 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 GFM1Q96RP9 751 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 CTDSP1Q9GZU7 261 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 MROH8Q9H579 483 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 THSD1Q9NS62 852 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SPATS2LQ9NUQ6 558 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 ZDHHC7Q9NXF8 308 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SEL1LQ9UBV2 794 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 FBXO2Q9UK22 296 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 UTS2RQ9UKP6 389 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SRPRBQ9Y5M8 271 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 PTPRZ1P23471 2315 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 PRRC2BQ5JSZ5 2229 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 ELP1O95163 1332 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 TRBV5-3A0A0A0MS03 114 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 TEX13CA0A0J9YWL9 993 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 TCRBV7S3A2A0A539 114 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CXorf65A6NEN9 183 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 MYMKA6NI61 221 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SOCS2O14508 198 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 PER2O15055 1255 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 DCXO43602 365 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 ZBED4O75132 1171 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CABYRO75952 493 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 NEURL1O76050 574 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 BAG3O95817 575 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SLC25A27O95847 323 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 DDAH2O95865 285 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SCGB1D1O95968 90 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 IFNA2P01563 188 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CYP21A2P08686 494 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SUPT20HL2P0C7V6 817 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CDH2P19022 906 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 C21orf58P58505 322 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 ARF3P61204 181 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 RPL7AP62424 266 aaKnown RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 ARF1P84077 181 aaKnown RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 EFNB1P98172 346 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SRSF1Q07955 248 aaKnown RBP eCLIP3.43□□□□□ -1.865e-12■■□□□ 12.5
SNHG1-202ENST00000535689 DSC1Q08554 894 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 GALNT2Q10471 571 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 ST3GAL1Q11201 340 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 ITGADQ13349 1161 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 RUNX2Q13950 521 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 INPP5JQ15735 1006 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CCDC142Q17RM4 750 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 FAM69AQ5T7M9 428 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 HEPHL1Q6MZM0 1159 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 KLHL24Q6TFL4 600 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 PARM1Q6UWI2 310 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 KIAA1324Q6UXG2 1013 aaKnown RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 B4GALNT4Q76KP1 1039 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 RTL10Q7L3V2 364 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SRRM1Q8IYB3 904 aaKnown RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 NANOGP1Q8N7R0 232 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 C2CD4CQ8TF44 421 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SGCDQ92629 289 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 COQ8BQ96D53 544 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 HARBI1Q96MB7 349 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 NLRP4Q96MN2 994 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 EIF2AK1Q9BQI3 630 aaKnown RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SCNM1Q9BWG6 230 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SIL1Q9H173 461 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CDT1Q9H211 546 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CATSPERBQ9H7T0 1116 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 PDGFCQ9NRA1 345 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SMC4Q9NTJ3 1288 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 TRNAU1APQ9NX07 287 aaKnown RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 EHD2Q9NZN4 543 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 UPB1Q9UBR1 384 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SLC25A10Q9UBX3 287 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CDH22Q9UJ99 828 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 RCE1Q9Y256 329 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CARD8Q9Y2G2 431 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 CACNA1AO00555 2505 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 REV3LO60673 3130 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 A0A1B0GUL6 1792 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 LOC285556D6RIA3 1793 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 SALL1Q9NSC2 1324 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
SNHG1-202ENST00000535689 FAM90A7PA6NKC0 464 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 FAM90A22PA8MWA6 464 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 FAM90A12PA8MX19 464 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 FAM90A23PA8MXZ1 464 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 B4E171 279 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 USP17L23D6RBM5 183 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 SNAP23O00161 211 aa3.42□□□□□ -1.86
SNHG1-202ENST00000535689 EBAG9O00559 213 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms