RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CDKN2BP42772 138 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 ABCG1P45844 678 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 LSSP48449 732 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 RPIAP49247 311 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 DPTQ07507 201 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.43
SMG1-203ENST00000532700 CERCAMQ5T4B2 595 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 KDELC2Q7Z4H8 507 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 RFX6Q8HWS3 928 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 GPBAR1Q8TDU6 330 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 FGF11Q92914 225 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 AP2M1Q96CW1 435 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 HERPUD2Q9BSE4 406 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 PHPT1Q9NRX4 125 aaPredicted RBP17.74■□□□□ 0.43
SMG1-203ENST00000532700 EVA1BQ9NVM1 165 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 CNOT6Q9ULM6 557 aaKnown RBP17.74■□□□□ 0.43
SMG1-203ENST00000532700 SLC17A4Q9Y2C5 497 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 CACNA1GO43497 2377 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 ZNF487B1APH4 448 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 APOL1O14791 398 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 INPP4BO15327 924 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 DXOO77932 396 aaKnown RBP17.73■□□□□ 0.43
SMG1-203ENST00000532700 EML2O95834 649 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 FGF1P05230 155 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 HGFP14210 728 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 CTBSQ01459 385 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 TLE3Q04726 772 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 AP1B1Q10567 949 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 TAZQ16635 292 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 C14orf28Q4W4Y0 310 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 FOXR1Q6PIV2 292 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 SLC30A9Q6PML9 568 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 ADAMTSL4Q6UY14 1074 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 MARK2Q7KZI7 788 aaKnown RBP17.73■□□□□ 0.43
SMG1-203ENST00000532700 SPACA3Q8IXA5 215 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 ATL2Q8NHH9 583 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 SPATA22Q8NHS9 363 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 GLMNQ92990 594 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 TADA1Q96BN2 335 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 AGAP3Q96P47 875 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 PANX2Q96RD6 677 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 DPEP2Q9H4A9 486 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 SEPT10Q9P0V9 454 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 TAAR2Q9P1P5 351 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 IMPACTQ9P2X3 320 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 AMACRQ9UHK6 382 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 PRKAB1Q9Y478 270 aa17.73■□□□□ 0.43
SMG1-203ENST00000532700 GOLGA6L6A8MZA4 724 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 TCEA3O75764 348 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 LCA5LO95447 670 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
SMG1-203ENST00000532700 MX2P20592 715 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 KELP23276 732 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 TEAD1P28347 426 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 ACTN2P35609 894 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 ADCY8P40145 1251 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 GPR1P46091 355 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 EPHB1P54762 984 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 SPIDRQ14159 915 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 NOMO1Q15155 1222 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 LRRC38Q5VT99 294 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 LYSMD3Q7Z3D4 306 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 SPRED1Q7Z699 444 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 C17orf82Q86X59 251 aaPredicted RBP17.72■□□□□ 0.43
SMG1-203ENST00000532700 CCNJLQ8IV13 435 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 RHOT1Q8IXI2 618 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 SCG3Q8WXD2 468 aaKnown RBP17.72■□□□□ 0.43
SMG1-203ENST00000532700 KRT35Q92764 455 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 IMP4Q96G21 291 aaKnown RBP17.72■□□□□ 0.43
SMG1-203ENST00000532700 SCARF2Q96GP6 870 aaPredicted RBP17.72■□□□□ 0.43
SMG1-203ENST00000532700 COX14Q96I36 57 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 LRRN3Q9H3W5 708 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 PRORYQ9H606 182 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 LCMT1Q9UIC8 334 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 INTUQ9ULD6 942 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 REXO2Q9Y3B8 237 aaKnown RBP17.72■□□□□ 0.43
SMG1-203ENST00000532700 ALG6Q9Y672 507 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 BPTFQ12830 3046 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 PTPRQQ9UMZ3 2332 aa17.72■□□□□ 0.43
SMG1-203ENST00000532700 C1orf232A0A0U1RR37 186 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 SOWAHDA6NJG2 315 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 F5H423 210 aaPredicted RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 B4GAT1O43505 415 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 MT-CYBP00156 380 aaPredicted RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 ZNF30P17039 623 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 CD68P34810 354 aaPredicted RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 MAGEA1P43355 309 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 B4GALNT1Q00973 533 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 PRKD1Q15139 912 aaPredicted RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 ZNF648Q5T619 568 aaPredicted RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 SPOCD1Q6ZMY3 1216 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 VSIG1Q86XK7 387 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 CCDC170Q8IYT3 715 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 NAGSQ8N159 534 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 HAUS1Q96CS2 278 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 SLC46A1Q96NT5 459 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 GFM1Q96RP9 751 aaKnown RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 LYSMD1Q96S90 227 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 C10orf88Q9H8K7 445 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms