RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 FKBP10Q96AY3 582 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 LENG9Q96B70 501 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 TMEM186Q96B77 213 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 SNRNP40Q96DI7 357 aaKnown RBP4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 PABPC5Q96DU9 382 aaKnown RBP4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 C5orf30Q96GV9 206 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 FBXL20Q96IG2 436 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 SIGLEC10Q96LC7 697 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 ZNF558Q96NG5 402 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 GPR78Q96P69 363 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 PIMREGQ9BSJ6 248 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 ABHD6Q9BV23 337 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 CACNG6Q9BXT2 260 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 ADGRE3Q9BY15 652 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 MCOLN1Q9GZU1 580 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 CNOT10Q9H9A5 744 aaKnown RBP4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 SERINC1Q9NRX5 453 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC35D1Q9NTN3 355 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 EHD3Q9NZN3 535 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 COX16Q9P0S2 106 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 TRIM10Q9UDY6 481 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 FETUBQ9UGM5 382 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 FBXW2Q9UKT8 454 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 CCPG1Q9ULG6 757 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 HPCAL4Q9UM19 191 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 VPS4AQ9UN37 437 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 TDRKHQ9Y2W6 561 aaKnown RBP4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 SH3BP1Q9Y3L3 701 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 ATP8B3O60423 1300 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 NPHP3Q7Z494 1330 aa4.36□□□□□ -1.71
AC055878.1-201ENST00000531858 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 C13orf42A0A1B0GVH6 325 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 MARCH11A6NNE9 402 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 AKR1B15C9JRZ8 316 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 H0YIN7 160 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 LEFTY2O00292 366 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PRYO14603 147 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 EIF3DO15371 548 aaKnown RBP eCLIP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 TSC22D2O75157 780 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 REC8O95072 547 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ZFPL1O95159 310 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CBX6O95503 412 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ADH4P08319 380 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PDHA1P08559 390 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 RFPL3SP0C7P2 107 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PPP3CBP16298 524 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 FERP16591 822 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ITIH1P19827 911 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ANXA7P20073 488 aaKnown RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 RYKP34925 604 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CTNNB1P35222 781 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 IFNAR2P48551 515 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ZNF75DP51815 510 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ARFIP1P53367 373 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 RABGGTBP53611 331 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 KLF10Q13118 480 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 BMPR2Q13873 1038 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 SOWAHAQ2M3V2 549 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CES4AQ5XG92 561 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PLEKHA7Q6IQ23 1121 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 NOTUMQ6P988 496 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 Q6ZWC4 215 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 DET1Q7L5Y6 550 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ARMC9Q7Z3E5 817 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 LDB1Q86U70 411 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 RASAL3Q86YV0 1011 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 DHX40Q8IX18 779 aaKnown RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 CARFQ8N187 725 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 KDM8Q8N371 416 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PAQR4Q8N4S7 273 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 LINC01465Q8N7H1 131 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 OCC1Q8TAD7 63 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ADAMTS14Q8WXS8 1223 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 SHC3Q92529 594 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 C14orf79Q96F83 325 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 P2RY11Q96G91 374 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PGBD1Q96JS3 809 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 TOX2Q96NM4 488 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 DIRC2Q96SL1 478 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 NAP1L3Q99457 506 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 HNRNPABQ99729 332 aaKnown RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PKP2Q99959 881 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 DPYSL5Q9BPU6 564 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 TCHPQ9BT92 498 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 ABHD14AQ9BUJ0 271 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PLA2G12BQ9BX93 195 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 C1QTNF5Q9BXJ0 243 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 DPH5Q9H2P9 285 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 GOLPH3LQ9H4A5 285 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 MAGIXQ9H6Y5 334 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 AKIRIN1Q9H9L7 192 aaPredicted RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 EPB41L5Q9HCM4 733 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 DDX4Q9NQI0 724 aaKnown RBP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 PAG1Q9NWQ8 432 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 KCTD5Q9NXV2 234 aa4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 AATFQ9NY61 560 aaKnown RBP eCLIP4.35□□□□□ -1.71
AC055878.1-201ENST00000531858 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms