RNA–Protein interactions for RNA: ENST00000489079.1

SRI-209, Transcript of sorcin, humanhuman

TSL 3

Gene SRI, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRI-209ENST00000489079 NUDCD1Q96RS6 583 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 TDRD1Q9BXT4 1180 aaKnown RBP9.45□□□□□ -0.9
SRI-209ENST00000489079 ATXN3LQ9H3M9 355 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 ACTR5Q9H9F9 607 aaPredicted RBP9.45□□□□□ -0.9
SRI-209ENST00000489079 SLCO1B3Q9NPD5 702 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 ASAH2Q9NR71 780 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 HCFC1R1Q9NWW0 138 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 SLC2A6Q9UGQ3 507 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 DCDC2Q9UHG0 476 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 ANKRD6Q9Y2G4 727 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 ACACAQ13085 2346 aa9.45□□□□□ -0.9
SRI-209ENST00000489079 CACNA1EQ15878 2313 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 FAM221BA6H8Z2 402 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 PATE3B3GLJ2 98 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 INSIG1O15503 277 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 LDB2O43679 373 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SNNO75324 88 aaPredicted RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 TMCC1O94876 653 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 FSBPO95073 299 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 VAPBO95292 243 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 CD160O95971 181 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 GSRP00390 522 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 TROVE2P10155 538 aaKnown RBP eCLIP9.44□□□□□ -0.9
SRI-209ENST00000489079 BGNP21810 368 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 GLDCP23378 1020 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 GABRB3P28472 473 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 TYK2P29597 1187 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 CD151P48509 253 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 OCRLQ01968 901 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 THOC5Q13769 683 aaKnown RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 LRRC32Q14392 662 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 GRM3Q14832 879 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 PCLAFQ15004 111 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 CYTH1Q15438 398 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SMAD1Q15797 465 aaKnown RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 CNGA3Q16281 694 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 CCDC153Q494R4 210 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 PLK5Q496M5 336 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SPDYAQ5MJ70 313 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 PPM1LQ5SGD2 360 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 RNF219Q5W0B1 726 aaPredicted RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 ATG16L1Q676U5 607 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 MBLAC2Q68D91 279 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 ZNF470Q6ECI4 717 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 TRPM8Q7Z2W7 1104 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 CMC1Q7Z7K0 106 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 OR13J1Q8NGT2 312 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SHKBP1Q8TBC3 707 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SCG3Q8WXD2 468 aaKnown RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 WNT2BQ93097 391 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SPON2Q9BUD6 331 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 TSSK1BQ9BXA7 367 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SLC13A1Q9BZW2 595 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 ABCF3Q9NUQ8 709 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 CFAP97Q9P2B7 532 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 MID2Q9UJV3 735 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SLC12A4Q9UP95 1085 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 MTO1Q9Y2Z2 717 aaKnown RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 USH1CQ9Y6N9 552 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 MTCL1Q9Y4B5 1905 aaKnown RBP9.44□□□□□ -0.9
SRI-209ENST00000489079 APC2O95996 2303 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 SPTA1P02549 2419 aa9.44□□□□□ -0.9
SRI-209ENST00000489079 A0A096LPK6 155 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 A0A1W2PRU2 124 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 CCDC78A2IDD5 438 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 WDR91A4D1P6 747 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 H0Y626 953 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 CBX4O00257 560 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 LCE2BO14633 110 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
SRI-209ENST00000489079 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
SRI-209ENST00000489079 GJB3O75712 270 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 TRIM16O95361 564 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 APOA4P06727 396 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 HNRNPA1P09651 372 aaKnown RBP eCLIP9.43□□□□□ -0.9
SRI-209ENST00000489079 COL6A2P12110 1019 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 TCF3P15923 654 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 GDI1P31150 447 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 CSKP41240 450 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 CCR2P41597 374 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 ABCG1P45844 678 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 ZNF140P52738 457 aaPredicted RBP9.43□□□□□ -0.9
SRI-209ENST00000489079 MPP1Q00013 466 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 BST1Q10588 318 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 USP4Q13107 963 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 CDH18Q13634 790 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 SPRED3Q2MJR0 410 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 GALNTL6Q49A17 601 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 MPPE1Q53F39 396 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 TAF1BQ53T94 588 aaPredicted RBP9.43□□□□□ -0.9
SRI-209ENST00000489079 NEPROQ6NW34 567 aa9.43□□□□□ -0.9
SRI-209ENST00000489079 DENND6AQ8IWF6 608 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms