RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SCAF11Q99590 1463 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 ARHGAP31Q2M1Z3 1444 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 PDS5AQ29RF7 1337 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 KIF7Q2M1P5 1343 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 IGLV5-45A0A087WSX0 123 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TARSL2A2RTX5 802 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 IGHV4-39P01824 125 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TRIM49P0CI25 452 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TRIM49CP0CI26 452 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TSPY4P0CV99 314 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TSPY10P0CW01 314 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 HNRNPH1P31943 449 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 HLCSP50747 726 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 DDX10Q13206 875 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 WDR38Q5JTN6 314 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 KIAA1324Q6UXG2 1013 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 Q6ZR54 194 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TRPT1Q86TN4 253 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 ZNF584Q8IVC4 421 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 WDR63Q8IWG1 891 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 LMNTD2Q8IXW0 634 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TSR2Q969E8 191 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 ZNF566Q969W8 418 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TBCBQ99426 244 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TP63Q9H3D4 680 aaPredicted RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TFB2MQ9H5Q4 396 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 STARD7Q9NQZ5 370 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 DDX21Q9NR30 783 aaKnown RBP eCLIP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 CYSLTR2Q9NS75 346 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 TMLHEQ9NVH6 421 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 IFT80Q9P2H3 777 aaPredicted RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 KLHL42Q9P2K6 505 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 KLQ9UEF7 1012 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 CACNG5Q9UF02 275 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 BAG5Q9UL15 447 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 MRPS28Q9Y2Q9 187 aaKnown RBP1.78□□□□□ -2.12
CCDC39-203ENST00000473854 CEP83Q9Y592 693 aa1.78□□□□□ -2.12
CCDC39-203ENST00000473854 RGPD1P0DJD0 1748 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 ABCA3Q99758 1704 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 PEAK1Q9H792 1746 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CDC42BPGQ6DT37 1551 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CEP170BQ9Y4F5 1589 aaPredicted RBP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 A2ML1A8K2U0 1454 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 ZFYVE9O95405 1425 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 ROCK2O75116 1388 aaKnown RBP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CLIC2O15247 247 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 IGKV3-15P01624 115 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 ITGA2P17301 1181 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 KLRK1P26718 216 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CHATP28329 748 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 AARSP49588 968 aaKnown RBP eCLIP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CLCNKAP51800 687 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 DLK1P80370 383 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 IFIT5Q13325 482 aaKnown RBP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 PMS2P11Q13670 270 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 NEDD9Q14511 834 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 RAB30Q15771 203 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CTF1Q16619 201 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 SNAI3Q3KNW1 292 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 TRIM60Q495X7 471 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CCDC184Q52MB2 194 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 FAM209BQ5JX69 171 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 SLC20A1Q8WUM9 679 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 ABHD8Q96I13 439 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 YME1L1Q96TA2 773 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 SYT17Q9BSW7 474 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 POLR3CQ9BUI4 534 aaPredicted RBP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 MAN1B1Q9UKM7 699 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 PADI1Q9ULC6 663 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 EXOGQ9Y2C4 368 aaKnown RBP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 LOXL2Q9Y4K0 774 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CLDN16Q9Y5I7 305 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 TUBGCP6Q96RT7 1819 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 WNK3Q9BYP7 1800 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 CASZ1Q86V15 1759 aa1.77□□□□□ -2.13
CCDC39-203ENST00000473854 FAM208AQ9UK61 1670 aaKnown RBP1.77□□□□□ -2.13
CCDC39-203ENST00000473854 DIP2AQ14689 1571 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 NWD1Q149M9 1564 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 UTRNP46939 3433 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 DLC1Q96QB1 1528 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 IQSEC2Q5JU85 1478 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 NLRP1Q9C000 1473 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 CD163L1Q9NR16 1453 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 BLMP54132 1417 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 KANK1Q14678 1352 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 PARD3Q8TEW0 1356 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ADGRF5Q8IZF2 1346 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 A0A087X002 238 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 SLCO1B7G3V0H7 640 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 NCK2O43639 380 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 HBP1O60381 514 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 FGF18O76093 207 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ATF3P18847 181 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 S1PR1P21453 382 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 EEF1GP26641 437 aaKnown RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 PIGAP37287 484 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 SLC18A2Q05940 514 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 SLC35G1Q2M3R5 365 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 PAPPA-AS1Q5QFB9 102 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 SLC25A30Q5SVS4 291 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms