RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PHTF1Q9UMS5 762 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 ANKRD6Q9Y2G4 727 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 WNT6Q9Y6F9 365 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 COMMD10Q9Y6G5 202 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 ZFHX4Q86UP3 3567 aa9.16□□□□□ -0.94
PTPRE-207ENST00000471218 RGSL1A5PLK6 1076 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CXorf49A8MYA2 514 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 TRIM49D1C9J1S8 452 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 F5H423 210 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 MAP3K13O43283 966 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 GLRA3O75311 464 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 ZNF821O75541 412 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 VAPBO95292 243 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CISD3P0C7P0 127 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CHN1P15882 459 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 LPOP22079 712 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 ARNTP27540 789 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 NMBRP28336 390 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CRABP2P29373 138 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 HMGCLP35914 325 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CHRNA4P43681 627 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 RGRP47804 291 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 LEPRP48357 1165 aaKnown RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CD151P48509 253 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 KPNA2P52292 529 aaKnown RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 ATXN3P54252 364 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 ST8SIA6P61647 398 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 PRAMEP78395 509 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 POU4F1Q01851 419 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 IHHQ14623 411 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 EFTUD2Q15029 972 aaKnown RBP eCLIP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CCDC6Q16204 474 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CNGA3Q16281 694 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 PCSK7Q16549 785 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 QPCTQ16769 361 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 TYSND1Q2T9J0 566 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 MYLK3Q32MK0 819 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 HSP90AA5PQ58FG0 334 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CARD16Q5EG05 197 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 EOGTQ5NDL2 527 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 LYPLAL1Q5VWZ2 237 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 MBLAC2Q68D91 279 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 GRAMD4Q6IC98 578 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CERS6Q6ZMG9 384 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 USP45Q70EL2 814 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 TRMT11Q7Z4G4 463 aaKnown RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 SDCCAG8Q86SQ7 713 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 ZC3HC1Q86WB0 502 aaKnown RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 APCDD1Q8J025 514 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 STK40Q8N2I9 435 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 CBARPQ8N350 705 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 OR13J1Q8NGT2 312 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 UCMAQ8WVF2 138 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 PTPRN2Q92932 1015 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 TSPAN17Q96FV3 270 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 HHIPQ96QV1 700 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 MCCC1Q96RQ3 725 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 SELENOSQ9BQE4 189 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 APOL2Q9BQE5 337 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 IQCGQ9H095 443 aaKnown RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 NSRP1Q9H0G5 558 aaKnown RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 EPN3Q9H201 632 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 POPDC3Q9HBV1 291 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 SMYD2Q9NRG4 433 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 C2orf42Q9NWW7 574 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 NFKBIL1Q9UBC1 381 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-207ENST00000471218 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 GRID1Q9ULK0 1009 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 ERVW-1Q9UQF0 538 aa9.15□□□□□ -0.94
PTPRE-207ENST00000471218 KIF26AQ9ULI4 1882 aaPredicted RBP9.15□□□□□ -0.95
PTPRE-207ENST00000471218 A0A0J9YYE9 177 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 LNP1A1A4G5 178 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 CAPN8A6NHC0 703 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 COPEO14579 308 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 KLF11O14901 512 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 BIRC5O15392 142 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 TULP3O75386 442 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 RFPL1O75677 317 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 SNUPNO95149 360 aaKnown RBP9.14□□□□□ -0.95
PTPRE-207ENST00000471218 ASMTLO95671 621 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 FAM107AO95990 144 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 MT-CO1P00395 513 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 IL1BP01584 269 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 TRBC1P01850 177 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 DHRS4L1P0CG22 281 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 ERVK-10P10266 1014 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 ARSAP15289 507 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF30P17039 623 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 TPH1P17752 444 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 CSRP3P50461 194 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 NEK3P51956 506 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 EPHB1P54762 984 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 GNGT1P63211 74 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 TRAF2Q12933 501 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 MTM1Q13496 603 aa9.14□□□□□ -0.95
PTPRE-207ENST00000471218 OLIG2Q13516 323 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms