RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	CCNT1	O60563	726 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	WNT1	P04628	370 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PTPN9	P43378	593 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CYP2J2	P51589	502 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RPS13	P62277	151 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PMPCA	Q10713	525 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NAA25	Q14CX7	972 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TWISTNB	Q3B726	338 aa	Predicted RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278		Q4G0T1	1027 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MIDN	Q504T8	468 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIAA1614	Q5VZ46	1190 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZNF626	Q68DY1	528 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CCDC70	Q6NSX1	233 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HMBOX1	Q6NT76	420 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ATF7IP	Q6VMQ6	1270 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GALNT7	Q86SF2	657 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PRSS3P2	Q8NHM4	247 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NCSTN	Q92542	709 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	EME1	Q96AY2	570 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RRP36	Q96EU6	259 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TGS1	Q96RS0	853 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	UTP14A	Q9BVJ6	771 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PHF7	Q9BWX1	381 aa	Predicted RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NRIP3	Q9NQ35	241 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RRAGD	Q9NQL2	400 aa	Predicted RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NLK	Q9UBE8	527 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HDAC6	Q9UBN7	1215 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZNF70	Q9UC06	446 aa	Predicted RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MTUS1	Q9ULD2	1270 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SUFU	Q9UMX1	484 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIF3A	Q9Y496	699 aa		5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SPEN	Q96T58	3664 aa	Known RBP	5.27	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ACACA	Q13085	2346 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	UMODL1	Q5DID0	1318 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	WDR91	A4D1P6	747 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278		A6NLC8	198 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	C17orf100	A8MU93	164 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RHOD	O00212	210 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HLA-DQA2	P01906	255 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ATP1A3	P13637	1013 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MTNR1A	P48039	350 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	C21orf58	P58505	322 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ID2	Q02363	134 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PLK5	Q496M5	336 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SLC9C2	Q5TAH2	1124 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	FAM171A1	Q5VUB5	890 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	JAKMIP3	Q5VZ66	844 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PAPD7	Q5XG87	772 aa	Known RBP	5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TTLL5	Q6EMB2	1281 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SLC22A25	Q6T423	547 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	LRIG3	Q6UXM1	1119 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CCDC25	Q86WR0	208 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SRRM1	Q8IYB3	904 aa	Known RBP	5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SCAI	Q8N9R8	606 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SMRP1	Q8NCR6	262 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RUFY2	Q8WXA3	655 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CUL5	Q93034	780 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZNF419	Q96HQ0	510 aa	Predicted RBP	5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CLSTN3	Q9BQT9	956 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	WASH6P	Q9NQA3	447 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ALKBH4	Q9NXW9	302 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	UPB1	Q9UBR1	384 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SLC13A4	Q9UKG4	626 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CACNA1D	Q01668	2161 aa		5.26	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ITPR2	Q14571	2701 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PTPRC	P08575	1304 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ATM	Q13315	3056 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TRBV5-3	A0A0A0MS03	114 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CCDC196	A0A1B0GTZ2	297 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278		A0A1B0GVC2	190 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	FAM90A7P	A6NKC0	464 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	FAM90A22P	A8MWA6	464 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	FAM90A12P	A8MX19	464 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	FAM90A23P	A8MXZ1	464 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	DYNC1I1	O14576	645 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	IPO8	O15397	1037 aa	Known RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PRPF4	O43172	522 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	STRN	O43815	780 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SH3BP5	O60239	455 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KCNK5	O95279	499 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	IFIT1	P09914	478 aa	Known RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	VDR	P11473	427 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MAPK4	P31152	587 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GGT5	P36269	586 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	STAT1	P42224	750 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SARNP	P82979	210 aa	Known RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TBL3	Q12788	808 aa	Known RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TROAP	Q12815	778 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MVP	Q14764	893 aa	Known RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KRT24	Q2M2I5	525 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TMEM268	Q5VZI3	342 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZNF793	Q6ZN11	406 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GPR142	Q7Z601	462 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ADGRG6	Q86SQ4	1221 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CERS5	Q8N5B7	392 aa		5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CMAS	Q8NFW8	434 aa	Predicted RBP	5.25	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ZBTB10	Q96DT7	871 aa		5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms