RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
CACNA1C-223ENST00000465278 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
CACNA1C-223ENST00000465278 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
CACNA1C-223ENST00000465278 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
CACNA1C-223ENST00000465278 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
CACNA1C-223ENST00000465278 FOXD1Q16676 465 aa18.44■□□□□ 0.54
CACNA1C-223ENST00000465278 ADRA2BP18089 450 aa18.02■□□□□ 0.48
CACNA1C-223ENST00000465278 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
CACNA1C-223ENST00000465278 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
CACNA1C-223ENST00000465278 MSH5O43196 834 aa16.79■□□□□ 0.28
CACNA1C-223ENST00000465278 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
CACNA1C-223ENST00000465278 KCNA4P22459 653 aa16.7■□□□□ 0.26
CACNA1C-223ENST00000465278 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-223ENST00000465278 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-223ENST00000465278 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
CACNA1C-223ENST00000465278 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
CACNA1C-223ENST00000465278 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
CACNA1C-223ENST00000465278 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
CACNA1C-223ENST00000465278 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
CACNA1C-223ENST00000465278 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
CACNA1C-223ENST00000465278 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
CACNA1C-223ENST00000465278 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
CACNA1C-223ENST00000465278 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
CACNA1C-223ENST00000465278 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
CACNA1C-223ENST00000465278 ZBTB22O15209 634 aa15.37■□□□□ 0.05
CACNA1C-223ENST00000465278 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
CACNA1C-223ENST00000465278 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.03
CACNA1C-223ENST00000465278 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
CACNA1C-223ENST00000465278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
CACNA1C-223ENST00000465278 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
CACNA1C-223ENST00000465278 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
CACNA1C-223ENST00000465278 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
CACNA1C-223ENST00000465278 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
CACNA1C-223ENST00000465278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-223ENST00000465278 HNRNPUL2Q1KMD3 747 aaKnown RBP14.56□□□□□ -0.08
CACNA1C-223ENST00000465278 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-223ENST00000465278 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-223ENST00000465278 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
CACNA1C-223ENST00000465278 APLP2Q06481 763 aa14.32□□□□□ -0.12
CACNA1C-223ENST00000465278 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
CACNA1C-223ENST00000465278 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
CACNA1C-223ENST00000465278 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-223ENST00000465278 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-223ENST00000465278 CAPN15O75808 1086 aa14.23□□□□□ -0.13
CACNA1C-223ENST00000465278 POLA2Q14181 598 aa14.07□□□□□ -0.16
CACNA1C-223ENST00000465278 ABCB7O75027 752 aa14.01□□□□□ -0.17
CACNA1C-223ENST00000465278 FKBP8Q14318 412 aa14.01□□□□□ -0.17
CACNA1C-223ENST00000465278 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-223ENST00000465278 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-223ENST00000465278 DSG3P32926 999 aa13.88□□□□□ -0.19
CACNA1C-223ENST00000465278 FBLN2P98095 1184 aa13.83□□□□□ -0.2
CACNA1C-223ENST00000465278 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
CACNA1C-223ENST00000465278 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-223ENST00000465278 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
CACNA1C-223ENST00000465278 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-223ENST00000465278 PROM2Q8N271 834 aa13.42□□□□□ -0.26
CACNA1C-223ENST00000465278 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
CACNA1C-223ENST00000465278 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
CACNA1C-223ENST00000465278 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
CACNA1C-223ENST00000465278 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
CACNA1C-223ENST00000465278 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
CACNA1C-223ENST00000465278 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
CACNA1C-223ENST00000465278 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-223ENST00000465278 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-223ENST00000465278 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-223ENST00000465278 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-223ENST00000465278 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-223ENST00000465278 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
CACNA1C-223ENST00000465278 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
CACNA1C-223ENST00000465278 MIER1Q8N108 512 aa13.03□□□□□ -0.32
CACNA1C-223ENST00000465278 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
CACNA1C-223ENST00000465278 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
CACNA1C-223ENST00000465278 KLHL34Q8N239 644 aa13□□□□□ -0.33
CACNA1C-223ENST00000465278 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
CACNA1C-223ENST00000465278 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-223ENST00000465278 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
CACNA1C-223ENST00000465278 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
CACNA1C-223ENST00000465278 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
CACNA1C-223ENST00000465278 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
CACNA1C-223ENST00000465278 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
CACNA1C-223ENST00000465278 PKD2Q13563 968 aa12.74□□□□□ -0.37
CACNA1C-223ENST00000465278 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-223ENST00000465278 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-223ENST00000465278 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
CACNA1C-223ENST00000465278 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
CACNA1C-223ENST00000465278 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-223ENST00000465278 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-223ENST00000465278 NUBP1P53384 320 aa12.6□□□□□ -0.39
CACNA1C-223ENST00000465278 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
CACNA1C-223ENST00000465278 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
CACNA1C-223ENST00000465278 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-223ENST00000465278 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNA1C-223ENST00000465278 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNA1C-223ENST00000465278 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
CACNA1C-223ENST00000465278 RGL2O15211 777 aa12.5□□□□□ -0.41
CACNA1C-223ENST00000465278 GSE1Q14687 1217 aa12.5□□□□□ -0.41
CACNA1C-223ENST00000465278 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-223ENST00000465278 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
CACNA1C-223ENST00000465278 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
CACNA1C-223ENST00000465278 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms