RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 LRP12Q9Y561 859 aa3.18□□□□□ -1.9
HDAC2-202ENST00000425835 MAU2Q9Y6X3 613 aa3.18□□□□□ -1.9
HDAC2-202ENST00000425835 DENND3A2RUS2 1198 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 MID1O15344 667 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 TIPRLO75663 272 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 SLC25A12O75746 678 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 TMEM63AO94886 807 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 SRCP12931 536 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 DAOP14920 347 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CHMP24386 653 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ARL3P36405 182 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 PPARGP37231 505 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CLCNKAP51800 687 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 HNRNPH2P55795 449 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CSNK2A1P68400 391 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 SETQ01105 290 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 FOXM1Q08050 763 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ZNF155Q12901 538 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CSTF3Q12996 717 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CDONQ4KMG0 1287 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 KCNT1Q5JUK3 1230 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 GPATCH4Q5T3I0 446 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CRELD2Q6UXH1 353 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 DPPA4Q7L190 304 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 BHLHA9Q7RTU4 235 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 TBC1D1Q86TI0 1168 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 NR2C2APQ86WQ0 139 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 SFR1Q86XK3 245 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 DCP1BQ8IZD4 617 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ANKRD52Q8NB46 1076 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CSNK2A3Q8NEV1 391 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 PPHLN1Q8NEY8 458 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 SPATA20Q8TB22 786 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ARHGEF26Q96DR7 871 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 BICD1Q96G01 975 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 GRAMD2BQ96HH9 432 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ZNF385AQ96PM9 386 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ACOX2Q99424 681 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 PCYT2Q99447 389 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 MTERF1Q99551 399 aaKnown RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 SH3GL2Q99962 352 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 FTOQ9C0B1 505 aaKnown RBP eCLIP3.17□□□□□ -1.96e-11■□□□□ 8.1
HDAC2-202ENST00000425835 EHD2Q9NZN4 543 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 CORO1CQ9ULV4 474 aaPredicted RBP3.17□□□□□ -1.9
HDAC2-202ENST00000425835 VDAC3Q9Y277 283 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 ADAM18Q9Y3Q7 739 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 LOXL2Q9Y4K0 774 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 PCDHAC2Q9Y5I4 1007 aa3.17□□□□□ -1.9
HDAC2-202ENST00000425835 A0A1W2PQF6 199 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 A0A1W2PRG0 241 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PGPEP1LA6NFU8 196 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 KRTAP29-1A8MX34 341 aaPredicted RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 RFPL2O75678 378 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 KCNK5O95279 499 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 EIF2S1P05198 315 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 DDX5P17844 614 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 RRM1P23921 792 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 TMPOP42166 694 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PIK3CAP42336 1068 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 RAD23BP54727 409 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 GAS1P54826 345 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 GEMIN4P57678 1058 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 BRWD1-AS2P59051 145 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 RPL36AP83881 106 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 SLC20A2Q08357 652 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 CDC16Q13042 620 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 CCDC96Q2M329 555 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ZSCAN23Q3MJ62 389 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 KLHL22Q53GT1 634 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 SNX30Q5VWJ9 437 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PLEKHA7Q6IQ23 1121 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ZNF280DQ6N043 979 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 IKBIPQ70UQ0 350 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ZNF34Q8IZ26 560 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 SRBD1Q8N5C6 995 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PCDH20Q8N6Y1 951 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ZNF441Q8N8Z8 693 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 SPATA22Q8NHS9 363 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 WFIKKN2Q8TEU8 576 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 SECTM1Q8WVN6 248 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 FIG4Q92562 907 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ARHGEF2Q92974 986 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 SKA1Q96BD8 255 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 FAM84BQ96KN1 310 aaPredicted RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PKNOX2Q96KN3 472 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PPP1R13BQ96KQ4 1090 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 C1orf74Q96LT6 269 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 IL17FQ96PD4 163 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 DUX5Q96PT3 197 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 MAP7D2Q96T17 732 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ITPAQ9BY32 194 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 ZNF69Q9UC07 566 aa3.16□□□□□ -1.9
HDAC2-202ENST00000425835 PDS5AQ29RF7 1337 aaKnown RBP3.16□□□□□ -1.9
HDAC2-202ENST00000425835 A0A087X0M5 115 aa3.15□□□□□ -1.91
HDAC2-202ENST00000425835 A0A1B0GX30 115 aa3.15□□□□□ -1.91
HDAC2-202ENST00000425835 MAGEA13PA6NCF6 341 aa3.15□□□□□ -1.91
HDAC2-202ENST00000425835 LIPT2A6NK58 231 aa3.15□□□□□ -1.91
HDAC2-202ENST00000425835 SPINT2O43291 252 aa3.15□□□□□ -1.91
HDAC2-202ENST00000425835 BUB3O43684 328 aa3.15□□□□□ -1.91
HDAC2-202ENST00000425835 USO1O60763 962 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms