RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 PON1P27169 355 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 EPHB2P29323 1055 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 HDAC4P56524 1084 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 UBE2HP62256 183 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 HHEXQ03014 270 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 CNGA3Q16281 694 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 EXOC3L4Q17RC7 722 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 GBP6Q6ZN66 633 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 FAM71AQ8IYT1 594 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 TSEN2Q8NCE0 465 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 GALNT6Q8NCL4 622 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 PDCD6IPQ8WUM4 868 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 RXFP2Q8WXD0 754 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 NCSTNQ92542 709 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 OR2M4Q96R27 311 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 PDCL3Q9H2J4 239 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 TMEM63CQ9P1W3 806 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 DNAJC12Q9UKB3 198 aa12.79□□□□□ -0.36
CHRNA1-203ENST00000409219 J3KR12 359 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 INPP4BO15327 924 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 KATNA1O75449 491 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 SDC4P31431 198 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 CSNK1DP48730 415 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 PGDP52209 483 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 CPZQ66K79 652 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 DOK6Q6PKX4 331 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 STRADAQ7RTN6 431 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 SRLQ86TD4 932 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 UMODL1-AS1Q8N2C9 162 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 Q8NA96 180 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 JOSD2Q8TAC2 188 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 NTAN1Q96AB6 310 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 DTD2Q96FN9 168 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 SCARF2Q96GP6 870 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 NSMCE3Q96MG7 304 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 KCND3Q9UK17 655 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 PCDHGA9Q9Y5G4 932 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 PCDHGA6Q9Y5G7 932 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 AKAP9Q99996 3911 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 CELSR1Q9NYQ6 3014 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 WASH4PA8MWX3 477 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 GADD45BO75293 160 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 ANKRD34CP0C6C1 535 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 CYP11B1P15538 503 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 GRNP28799 593 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 ETV3P41162 512 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 PTPN9P43378 593 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 NOMO3P69849 1222 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 BCL2L1Q07817 233 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 FOXM1Q08050 763 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 CHAF1BQ13112 559 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 NFATC2Q13469 925 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 RAET1GQ6H3X3 334 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 FNIP1Q8TF40 1166 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 STAMBPL1Q96FJ0 436 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 SLC25A23Q9BV35 468 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 SLC29A3Q9BZD2 475 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 MLXIPLQ9NP71 852 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 LUZP4Q9P127 313 aa12.78□□□□□ -0.36
CHRNA1-203ENST00000409219 APCP25054 2843 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 PIPSLA2A3N6 862 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 GTPBP10A4D1E9 387 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 A6NCN8 305 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 GOLGA6CA6NDK9 693 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 C2CD4BA6NLJ0 364 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 PRAMEF11O60813 436 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 KIAA0754O94854 1291 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 LSM8O95777 96 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 RECKO95980 971 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 GOLGA6DP0CG33 693 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 TEAD1P28347 426 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 MAPK9P45984 424 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 EPHA4P54764 986 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 POLR2LP62875 67 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 PAK1Q13153 545 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 DNASE1L3Q13609 305 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 PYCR3Q53H96 274 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 DENND2CQ68D51 928 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 LYSMD3Q7Z3D4 306 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 FAM172AQ8WUF8 416 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 CENPIQ92674 756 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 LRRC19Q9H756 370 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 GOLGA6AQ9NYA3 693 aa12.77□□□□□ -0.37
CHRNA1-203ENST00000409219 CROCCQ5TZA2 2017 aa12.76□□□□□ -0.37
CHRNA1-203ENST00000409219 CREB3O43889 395 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms