RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 RAG1P15918 1043 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 SQLEQ14534 574 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 PIGGQ5H8A4 983 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 EFCAB3Q8N7B9 438 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 ASB2Q96Q27 587 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 ADGRE3Q9BY15 652 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 DERL2Q9GZP9 239 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 SYTL2Q9HCH5 934 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 TAS2R13Q9NYV9 303 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 MED16Q9Y2X0 877 aa18.56■□□□□ 0.56
SIL1-202ENST00000394817 MTHFD2P13995 350 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 LPOP22079 712 aaPredicted RBP18.55■□□□□ 0.56
SIL1-202ENST00000394817 RAB33AQ14088 237 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 NECAB2Q7Z6G3 386 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 TMEM150AQ86TG1 271 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 KBTBD6Q86V97 674 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 SLC39A11Q8N1S5 342 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 PTGR2Q8N8N7 351 aaPredicted RBP18.55■□□□□ 0.56
SIL1-202ENST00000394817 VPS9D1Q9Y2B5 631 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 PCDHGC4Q9Y5F7 938 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 LAMA2P24043 3122 aaKnown RBP18.55■□□□□ 0.56
SIL1-202ENST00000394817 ANKRD66B4E2M5 251 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 KERAO60938 352 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 RHOBTB1O94844 696 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 KLC1Q07866 573 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 TWF1Q12792 350 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 TRAF2Q12933 501 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 SETMARQ53H47 684 aaPredicted RBP18.55■□□□□ 0.56
SIL1-202ENST00000394817 IRGCQ6NXR0 463 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 CYHR1Q6ZMK1 362 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 RNF111Q6ZNA4 994 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 RYBPQ8N488 228 aaPredicted RBP18.55■□□□□ 0.56
SIL1-202ENST00000394817 HMGCLL1Q8TB92 370 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 EXT2Q93063 718 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 KIAA1191Q96A73 305 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 ZNF558Q96NG5 402 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 ZBED2Q9BTP6 218 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 CCDC68Q9H2F9 335 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 WDR41Q9HAD4 459 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 LHX3Q9UBR4 397 aa18.55■□□□□ 0.56
SIL1-202ENST00000394817 ZNF106Q9H2Y7 1883 aaKnown RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 SCN8AQ9UQD0 1980 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 CCDC189A1A4V9 331 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 LCHNA4D1U4 455 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 UBXN8O00124 270 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 UBDO15205 165 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 SNAP91O60641 907 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 NDUFS3O75489 264 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 SRP72O76094 671 aaKnown RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 MBL2P11226 248 aaPredicted RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 THOP1P52888 689 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 MRPS35P82673 323 aaKnown RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 PTK2BQ14289 1009 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 MAPRE2Q15555 327 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 ZNF423Q2M1K9 1284 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 INO80DQ53TQ3 878 aaPredicted RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 CLEC6AQ6EIG7 209 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 NCEH1Q6PIU2 408 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 OTOP2Q7RTS6 562 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 RAB44Q7Z6P3 723 aaPredicted RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 DNAJB7Q7Z6W7 309 aaPredicted RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 SMIM14Q96QK8 99 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 CDRT15Q96T59 188 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 SMPD4Q9NXE4 827 aa18.54■□□□□ 0.56
SIL1-202ENST00000394817 OAS3Q9Y6K5 1087 aaKnown RBP18.54■□□□□ 0.56
SIL1-202ENST00000394817 GFRA2O00451 464 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 PRRG1O14668 218 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 ENO3P13929 434 aaPredicted RBP18.53■□□□□ 0.56
SIL1-202ENST00000394817 FMO4P31512 558 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 SMAD3P84022 425 aaKnown RBP18.53■□□□□ 0.56
SIL1-202ENST00000394817 ART3Q13508 389 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 PPP1R3AQ16821 1122 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 PAQR3Q6TCH7 311 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 IZUMO2Q6UXV1 221 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 LINGO4Q6UY18 593 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 GK5Q6ZS86 529 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 HJURPQ8NCD3 748 aaPredicted RBP18.53■□□□□ 0.56
SIL1-202ENST00000394817 UTP6Q9NYH9 597 aaKnown RBP18.53■□□□□ 0.56
SIL1-202ENST00000394817 H3BNX3 289 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 H7C0S8 307 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 TBL1XO60907 577 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 SMNDC1O75940 238 aaKnown RBP eCLIP18.53■□□□□ 0.56
SIL1-202ENST00000394817 FGF4P08620 206 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 TSPAN8P19075 237 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 CD9P21926 228 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 MZF1P28698 734 aaPredicted RBP18.53■□□□□ 0.56
SIL1-202ENST00000394817 DPP6P42658 865 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 TTPAP49638 278 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 ATP6V0D1P61421 351 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 CDC16Q13042 620 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 UGT3A2Q3SY77 523 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 LARP4Q71RC2 724 aaKnown RBP eCLIP18.53■□□□□ 0.564e-6■■■□□ 17.7
SIL1-202ENST00000394817 TCEAL8Q8IYN2 117 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 CLYBLQ8N0X4 340 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 TTC30BQ8N4P2 665 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 STAG3L4Q8TBR4 150 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 AUTS2Q8WXX7 1259 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 C19orf60Q96EN9 201 aa18.53■□□□□ 0.56
SIL1-202ENST00000394817 BIRC8Q96P09 236 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms