RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PIP5K1AQ99755 562 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 PIF1Q9H611 641 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF385DQ9H6B1 395 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 PNPLA8Q9NP80 782 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CD274Q9NZQ7 290 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 GGA1Q9UJY5 639 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 SCAF8Q9UPN6 1271 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TANC1Q9C0D5 1861 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TP53BP1Q12888 1972 aaPredicted RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 A0A0U1RQS6 177 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 K7ENM7 598 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 DNAJB5O75953 348 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 RGS20O76081 388 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TCF3P15923 654 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TRAP1Q12931 704 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 PPP1R8Q12972 351 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TAB1Q15750 504 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 NLRP8Q86W28 1048 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CYP2W1Q8TAV3 490 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 HMGCLL1Q8TB92 370 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 RORBQ92753 470 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 SH2D3AQ9BRG2 576 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 RHNO1Q9BSD3 238 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CAB39LQ9H9S4 337 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 ANKRD6Q9Y2G4 727 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 SRP72O76094 671 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 LRIG2O94898 1065 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 PGLSO95336 258 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 HNF1BP35680 557 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 RPL14P50914 215 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 FAPQ12884 760 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 TRAF3Q13114 568 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 PPIL2Q13356 520 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 LAPTM5Q13571 262 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 GPR50Q13585 617 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 IRF3Q14653 427 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF404Q494X3 552 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 C6orf141Q5SZD1 244 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 DENND5AQ6IQ26 1287 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 KRT28Q7Z3Y7 464 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 RAB43Q86YS6 212 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 MICU2Q8IYU8 434 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 CHDHQ8NE62 594 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 MXRA8Q9BRK3 442 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 DCSTAMPQ9H295 470 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 DCDC2Q9UHG0 476 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 EVLQ9UI08 416 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 TNS3Q68CZ2 1445 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 TRAV20A0A0B4J274 112 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 FAM159BA6NKW6 160 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 OR2B3O76000 313 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 CYP3A4P08684 503 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 PCMT1P22061 227 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ATP5OP48047 213 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 INPP5AQ14642 412 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ACOX1Q15067 660 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 POU4F3Q15319 338 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 STXBP2Q15833 593 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 RBM23Q86U06 439 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 C8orf59Q8N0T1 100 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC7A6Q92536 515 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 NSUN4Q96CB9 384 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 PPP1R2P1Q96PQ5 205 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF300Q96RE9 604 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 FAM126AQ9BYI3 521 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF556Q9HAH1 456 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 HPS4Q9NQG7 708 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 ADGRE2Q9UHX3 823 aa12.51□□□□□ -0.41
SLC28A1-203ENST00000394573 NOBOXO60393 691 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 FADS2O95864 444 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 GAP43P17677 238 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 TNNI3P19429 210 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 AZGP1P25311 298 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 PIGAP37287 484 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 NAGLUP54802 743 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 NKX3-2P78367 333 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 ORC1Q13415 861 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 MADCAM1Q13477 382 aa12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 FASTKQ14296 549 aaKnown RBP12.5□□□□□ -0.41
SLC28A1-203ENST00000394573 FSCN1Q16658 493 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms