RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TLE6Q9H808 572 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
C9orf47-203ENST00000375851 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 TBX18O95935 607 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 SPAM1P38567 509 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 CHRNA4P43681 627 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 PAGE2Q7Z2X7 111 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 SLC35F5Q8WV83 523 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 C19orf60Q96EN9 201 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 SCLYQ96I15 445 aa13.6□□□□□ -0.23
C9orf47-203ENST00000375851 DDX18Q9NVP1 670 aaKnown RBP13.6□□□□□ -0.23
C9orf47-203ENST00000375851 POLR3HQ9Y535 204 aaPredicted RBP13.6□□□□□ -0.23
C9orf47-203ENST00000375851 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 A0A0U1RQF3 1178 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 RPL3P39023 403 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ALFQ53S48 1182 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ZC3H7AQ8IWR0 971 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FSTL5Q8N475 847 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 DCBLD1Q8N8Z6 715 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 HEXDCQ8WVB3 486 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FAIM2Q9BWQ8 316 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 GRIP2Q9C0E4 1043 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 GTF2A1LQ9UNN4 478 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 PTPRJQ12913 1337 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 SLC7A4O43246 635 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 STK16O75716 305 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 F2P00734 622 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FGBP02675 491 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 CACNG1Q06432 222 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 AP5B1Q2VPB7 878 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 RAVER1Q8IY67 606 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FETUBQ9UGM5 382 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 Q9Y3F1 56 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 DLGAP3O95886 979 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 EIF2S1P05198 315 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ITPKAP23677 461 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 GRIA1P42261 906 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 CHN2P52757 468 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 PPIDQ08752 370 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ARHGAP36Q6ZRI8 547 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ZNF605Q86T29 641 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 BRSK1Q8TDC3 778 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 C3orf18Q9UK00 162 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 TMEM59LQ9UK28 342 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 NRP1O14786 923 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FGF19O95750 216 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 TLX1P31314 330 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 GNPDA1P46926 289 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 AP1S1P61966 158 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ACAP2Q15057 778 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 ZNF792Q3KQV3 632 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 LACTB2Q53H82 288 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 MTERF3Q96E29 417 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 B3GALT6Q96L58 329 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 OSBPL7Q9BZF2 842 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 OSBPL6Q9BZF3 934 aa13.59□□□□□ -0.23
C9orf47-203ENST00000375851 FCF1Q9Y324 198 aaKnown RBP13.59□□□□□ -0.23
C9orf47-203ENST00000375851 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.58□□□□□ -0.24
C9orf47-203ENST00000375851 TCRBV7S3A2A0A539 114 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 UNCXA6NJT0 531 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 ISM1B1AKI9 464 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 H0Y858 1186 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
C9orf47-203ENST00000375851 HTR1BP28222 390 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 GRB14Q14449 540 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 ZDHHC20Q5W0Z9 365 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 HLA-DQA1Q5Y7H0 255 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 DPP10Q8N608 796 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 NELL1Q92832 810 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 C9IYK1 514 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 PRR23D1E9PI22 279 aaPredicted RBP13.58□□□□□ -0.24
C9orf47-203ENST00000375851 ERAL1O75616 437 aaKnown RBP13.58□□□□□ -0.24
C9orf47-203ENST00000375851 PRR23D2P0DMB1 279 aaPredicted RBP13.58□□□□□ -0.24
C9orf47-203ENST00000375851 KCNE1P15382 129 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 GJA9P57773 515 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 PDK3Q15120 406 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 FAM182AQ5T1J6 154 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 CLEC6AQ6EIG7 209 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 VN1R5Q7Z5H4 357 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 HPS6Q86YV9 775 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 FCRL5Q96RD9 977 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 FAM83DQ9H4H8 585 aa13.58□□□□□ -0.24
C9orf47-203ENST00000375851 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms