RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MPP3Q13368 585 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 BIRC2Q13490 618 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 SEL1L2Q5TEA6 688 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 ADAMTSL4Q6UY14 1074 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 SPATA22Q8NHS9 363 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 PDXPQ96GD0 296 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 HIC2Q96JB3 615 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 FCRL5Q96RD9 977 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 GSDMCQ9BYG8 508 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 CARS2Q9HA77 564 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 UBP1Q9NZI7 540 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 TRIM10Q9UDY6 481 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 GPR34Q9UPC5 381 aa15.72■□□□□ 0.11
TSPAN4-201ENST00000346501 GCATO75600 419 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 MT-CYBP00156 380 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 EPOP01588 193 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 GIMD1P0DJR0 217 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 PYGMP11217 842 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 RBL1P28749 1068 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 SPINT3P49223 89 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 ADCY2Q08462 1091 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 WASHC5Q12768 1159 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 CDKN3Q16667 212 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 ST3GAL2Q16842 350 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 HES3Q5TGS1 186 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 ZNF567Q8N184 647 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 PDCD7Q8N8D1 485 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 ARL10Q8N8L6 244 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 WDR48Q8TAF3 677 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 IFI44Q8TCB0 444 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 MAPK15Q8TD08 544 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 OR1E3Q8WZA6 343 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 ALG3Q92685 438 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 SCAMP4Q969E2 229 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 RIOK2Q9BVS4 552 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 BOCQ9BWV1 1114 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 LGR4Q9BXB1 951 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 TRABDQ9H4I3 376 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 SUDS3Q9H7L9 328 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 FGF22Q9HCT0 170 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 HACD3Q9P035 362 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 PADI4Q9UM07 663 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 CLCA2Q9UQC9 943 aa15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 AAR2Q9Y312 384 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-201ENST00000346501 GOLGA4Q13439 2230 aaKnown RBP15.71■□□□□ 0.1
TSPAN4-201ENST00000346501 ARID1BQ8NFD5 2236 aaPredicted RBP15.71■□□□□ 0.1
TSPAN4-201ENST00000346501 ACACBO00763 2458 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 EME2A4GXA9 379 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 GOLGA6L3A6NEY3 463 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 C1QTNF9BB2RNN3 333 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 KCNN4O15554 427 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 ZW10O43264 779 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 SLC4A1P02730 911 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 C1QTNF9P0C862 333 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 HLA-DPA1P20036 260 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 WNT3AP56704 352 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 PTPRRQ15256 657 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 TCEA2Q15560 299 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 ZDHHC20Q5W0Z9 365 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 DOK6Q6PKX4 331 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 EFL1Q7Z2Z2 1120 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 LYSMD3Q7Z3D4 306 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 LRRC8AQ8IWT6 810 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 IPMKQ8NFU5 416 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 GATA6Q92908 595 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 DEPDC7Q96QD5 511 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 CLPBQ9H078 707 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 DPEP2Q9H4A9 486 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 CCDC86Q9H6F5 360 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 MRPL40Q9NQ50 206 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 TRNAU1APQ9NX07 287 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 SIRPGQ9P1W8 387 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 PACSIN2Q9UNF0 486 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 SHOC2Q9UQ13 582 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 ZNF711Q9Y462 761 aa15.7■□□□□ 0.1
TSPAN4-201ENST00000346501 A0A0U1RQS6 177 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 INPP4BO15327 924 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 OPA1O60313 960 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 IVLP07476 585 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 GNPDA1P46926 289 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 IHHQ14623 411 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 GALNT13Q8IUC8 556 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 CACTIN-AS1Q8N1I8 211 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 ZCCHC14Q8WYQ9 949 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 TADA1Q96BN2 335 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 HES6Q96HZ4 224 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 SMIM14Q96QK8 99 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 TRIB3Q96RU7 358 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 ZSCAN5AQ9BUG6 496 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 SPATA16Q9BXB7 569 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 FRMD8Q9BZ67 464 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 TMEM168Q9H0V1 697 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 GBA3Q9H227 469 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 GPSM3Q9Y4H4 160 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 CAPN6Q9Y6Q1 641 aa15.69■□□□□ 0.1
TSPAN4-201ENST00000346501 FAM149AA5PLN7 773 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 MT-CO3P00414 261 aa15.68■□□□□ 0.1
TSPAN4-201ENST00000346501 FGF1P05230 155 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms