RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 RAB41Q5JT25 222 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 PTGR2Q8N8N7 351 aaPredicted RBP23.59■■□□□ 1.37
TSKU-201ENST00000333090 ALG2Q9H553 416 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 ZFYVE28Q9HCC9 887 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 IFT80Q9P2H3 777 aaPredicted RBP23.59■■□□□ 1.37
TSKU-201ENST00000333090 BTRCQ9Y297 605 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 ZFC3H1O60293 1989 aaKnown RBP23.58■■□□□ 1.37
TSKU-201ENST00000333090 B4GAT1O43505 415 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 NFATC3Q12968 1075 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 CILP2Q8IUL8 1156 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 GOLM1Q8NBJ4 401 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 ACDQ96AP0 544 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 SEPHS2Q99611 448 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 NEU3Q9UQ49 428 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 CRYL1Q9Y2S2 319 aa23.58■■□□□ 1.37
TSKU-201ENST00000333090 H3BMM5 538 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 LINC00032P0C843 101 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 GSK3BP49841 420 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 SLC14A2Q15849 920 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 FAM117BQ6P1L5 589 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 COLGALT2Q8IYK4 626 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 VPS33AQ96AX1 596 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 ZFP42Q96MM3 310 aa23.58■■□□□ 1.36
TSKU-201ENST00000333090 NSUN5Q96P11 429 aaKnown RBP23.58■■□□□ 1.36
TSKU-201ENST00000333090 TMEM221A6NGB7 291 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 AZIN1O14977 448 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 FUCA1P04066 466 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 MATN1P21941 496 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 POLR2IP36954 125 aaKnown RBP23.57■■□□□ 1.36
TSKU-201ENST00000333090 NFYCQ13952 458 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 MOGQ16653 247 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 DQX1Q8TE96 717 aaKnown RBP23.57■■□□□ 1.36
TSKU-201ENST00000333090 RSPH1Q8WYR4 309 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 SENP8Q96LD8 212 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 KCTD14Q9BQ13 255 aaPredicted RBP23.57■■□□□ 1.36
TSKU-201ENST00000333090 ARMC7Q9H6L4 198 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 PCDHA9Q9Y5H5 950 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 FNDC1Q4ZHG4 1894 aaPredicted RBP23.57■■□□□ 1.36
TSKU-201ENST00000333090 FAM163BP0C2L3 166 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 CCNA2P20248 432 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 OTUD3Q5T2D3 398 aaPredicted RBP23.57■■□□□ 1.36
TSKU-201ENST00000333090 OR13J1Q8NGT2 312 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 GABPB2Q8TAK5 448 aaPredicted RBP23.57■■□□□ 1.36
TSKU-201ENST00000333090 ANAPC2Q9UJX6 822 aa23.57■■□□□ 1.36
TSKU-201ENST00000333090 OR51F1A6NGY5 319 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 CASP2P42575 452 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 HLCSP50747 726 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 DIO3P55073 304 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 PFKFB4Q16877 469 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 XKR4Q5GH76 650 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 PHYKPLQ8IUZ5 450 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 TMEM125Q96AQ2 219 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 TUBB1Q9H4B7 451 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 SDR39U1Q9NRG7 319 aaPredicted RBP23.56■■□□□ 1.36
TSKU-201ENST00000333090 INIPQ9NRY2 104 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 IPPQ9Y573 584 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 BAIAP3O94812 1187 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 LDLRP01130 860 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 MYL3P08590 195 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 LBPP18428 481 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 CES1P23141 567 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 ELK4P28324 431 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 RAB15P59190 212 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 GNA12Q03113 381 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 ZIK1Q3SY52 487 aaPredicted RBP23.56■■□□□ 1.36
TSKU-201ENST00000333090 PDCD4Q53EL6 469 aaKnown RBP23.56■■□□□ 1.36
TSKU-201ENST00000333090 CCNYL2Q5T2Q4 361 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 DCP1BQ8IZD4 617 aaKnown RBP23.56■■□□□ 1.36
TSKU-201ENST00000333090 PIF1Q9H611 641 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 FANCEQ9HB96 536 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 C8orf4Q9NR00 106 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 CORINQ9Y5Q5 1042 aa23.56■■□□□ 1.36
TSKU-201ENST00000333090 LIPEQ05469 1076 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 NR1D2Q14995 579 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 UBXN11Q5T124 520 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 SLC15A4Q8N697 577 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 INTS10Q9NVR2 710 aaKnown RBP23.55■■□□□ 1.36
TSKU-201ENST00000333090 MARCH4Q9P2E8 410 aaPredicted RBP23.55■■□□□ 1.36
TSKU-201ENST00000333090 POLG2Q9UHN1 485 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 HHLA1C9JL84 531 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 UBXN8O00124 270 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 MMP3P08254 477 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 SERPINH1P50454 418 aaKnown RBP23.55■■□□□ 1.36
TSKU-201ENST00000333090 BCAP31P51572 246 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 BLOC1S3Q6QNY0 202 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 TBPL2Q6SJ96 375 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 SMG8Q8ND04 991 aaKnown RBP23.55■■□□□ 1.36
TSKU-201ENST00000333090 EMID1Q96A84 441 aaPredicted RBP23.55■■□□□ 1.36
TSKU-201ENST00000333090 VTA1Q9NP79 307 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 RGS18Q9NS28 235 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 TMEM9Q9P0T7 183 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 PDCD11Q14690 1871 aaKnown RBP23.55■■□□□ 1.36
TSKU-201ENST00000333090 ZNF236Q9UL36 1845 aa23.55■■□□□ 1.36
TSKU-201ENST00000333090 TCRBV5S2A0A599 114 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 TRIM64BA6NI03 449 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 CXCL11O14625 94 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 SERPINB7O75635 380 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 ARSDP51689 593 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 ITKQ08881 620 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 TBC1D21Q8IYX1 336 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms