RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 E7ENX8 843 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 H7C4K7 107 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 PSMD12O00232 456 aaPredicted RBP10.33□□□□□ -0.76
UPF3B-201ENST00000276201 DLGAP1O14490 977 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 NCAM2O15394 837 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 MFSD11O43934 449 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 GRAP2O75791 330 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 OAZ2O95190 189 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 STAMBPO95630 424 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 ODC1P11926 461 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 TYMPP19971 482 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 GABRB3P28472 473 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 TKTL1P51854 596 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 AIF1P55008 147 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 C16orf72Q14CZ0 275 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 TGFBIQ15582 683 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 NRF1Q16656 503 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 UGP2Q16851 508 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 SLC36A3Q495N2 470 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 SV2CQ496J9 727 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 C1QTNF12Q5T7M4 302 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 SLC8B1Q6J4K2 584 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 ZNF280DQ6N043 979 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 LRRC8EQ6NSJ5 796 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 DCDC5Q6ZRR9 648 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 LINC00299Q6ZSB3 139 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 PDZD4Q76G19 769 aaPredicted RBP10.33□□□□□ -0.76
UPF3B-201ENST00000276201 ZC3HC1Q86WB0 502 aaKnown RBP10.33□□□□□ -0.76
UPF3B-201ENST00000276201 LRRC52Q8N7C0 313 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 TRUB1Q8WWH5 349 aaKnown RBP10.33□□□□□ -0.76
UPF3B-201ENST00000276201 GPR78Q96P69 363 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 NECAB3Q96P71 396 aaPredicted RBP10.33□□□□□ -0.76
UPF3B-201ENST00000276201 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 MAGEE1Q9HCI5 957 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 ARHGEF38Q9NXL2 777 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 FBXW11Q9UKB1 542 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 TRHDEQ9UKU6 1024 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 COQ6Q9Y2Z9 468 aa10.33□□□□□ -0.76
UPF3B-201ENST00000276201 STX16-NPEPL1H3BU86 382 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 NEMP1O14524 444 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 XPO1O14980 1071 aaKnown RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 DLX3O60479 287 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 MAP3K6O95382 1288 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 CYP11A1P05108 521 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 PDGFRBP09619 1106 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 PNPLA4P41247 253 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 HCAR3P49019 387 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 BCAP31P51572 246 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 YWHAHQ04917 246 aaPredicted RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TUBA3CQ13748 450 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 ATP6AP1Q15904 470 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 PPP1R26Q5T8A7 1209 aaPredicted RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 OVOS1Q6IE37 1185 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 KREMEN2Q8NCW0 462 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 DDHD1Q8NEL9 900 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 HMGCLL1Q8TB92 370 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 CCDC126Q96EE4 140 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TMA16Q96EY4 203 aaKnown RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 PLEKHA8Q96JA3 519 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FEM1CQ96JP0 617 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 HSFY1Q96LI6 401 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 VAT1Q99536 393 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 LGMNQ99538 433 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 NPAS2Q99743 824 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 SLX1AQ9BQ83 275 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 C9orf16Q9BUW7 83 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 KIFC1Q9BW19 673 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TASP1Q9H6P5 420 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 ADA2Q9NZK5 511 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 CROTQ9UKG9 612 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FAM50BQ9Y247 325 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TMED5Q9Y3A6 229 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 MTCL1Q9Y4B5 1905 aaKnown RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 A0A087X1B8 175 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FUOMA2VDF0 154 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 H3BMQ9 156 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FBP2O00757 339 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 RFPL2O75678 378 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 SRP72O76094 671 aaKnown RBP10.32□□□□□ -0.76
UPF3B-201ENST00000276201 CPNE6O95741 557 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 SLC35E2BP0CK96 405 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FCGR1AP12314 374 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 HSD17B1P14061 328 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 GOT1P17174 413 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TMBIM6P55061 237 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 OXCT1P55809 520 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 CTBSQ01459 385 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 BNIP2Q12982 314 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 WSCD1Q658N2 575 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TMEM198Q66K66 360 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 TMC5Q6UXY8 1006 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 DHFR2Q86XF0 187 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 MYO1HQ8N1T3 1032 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 FAM47BQ8NA70 645 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 SPPL2BQ8TCT7 592 aa10.32□□□□□ -0.76
UPF3B-201ENST00000276201 SNRNP27Q8WVK2 155 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms