RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 USP43Q70EL4 1123 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 GPR180Q86V85 440 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 SLC34A3Q8N130 599 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 MARVELD2Q8N4S9 558 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 FBXO32Q969P5 355 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 ULBP1Q9BZM6 244 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 SLC9A8Q9Y2E8 581 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 SH3BP1Q9Y3L3 701 aa13.79□□□□□ -0.2
HCFC2-201ENST00000229330 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 A0A0J9YVX5 310 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 NPHS1O60500 1241 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 GCATO75600 419 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 GABBR2O75899 941 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 NR2F6P10588 404 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 TNFSF9P41273 254 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 RHOAP61586 193 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 COLEC12Q5KU26 742 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 EHD1Q9H4M9 534 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CPA4Q9UI42 421 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CORO2BQ9UQ03 480 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CLCA2Q9UQC9 943 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 TLL2Q9Y6L7 1015 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SLC12A8A0AV02 714 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 H7C0S8 307 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 OTCP00480 354 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 RHOCP08134 193 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CDH18Q13634 790 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CDK20Q8IZL9 346 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 STK40Q8N2I9 435 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 ZNF395Q9H8N7 513 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 C12orf4Q9NQ89 552 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SNX6Q9UNH7 406 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 A0A1W2PRG6 482 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 FGF10O15520 208 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CD86P42081 329 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CTSKP43235 329 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 OR1G1P47890 313 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 STARP49675 285 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 GPX6P59796 221 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 GBE1Q04446 702 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 MYBPC3Q14896 1274 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CANT1Q8WVQ1 401 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 PIH1D2Q8WWB5 315 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 CPXM1Q96SM3 734 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 MED28Q9H204 178 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 ABCB9Q9NP78 766 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SUCOQ9UBS9 1254 aaKnown RBP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 ELOVL7A1L3X0 281 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 RFXANKO14593 260 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SUV39H1O43463 412 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 AMHP03971 560 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 RPLP0P05388 317 aaKnown RBP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 FGFR1P11362 822 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 PTPRAP18433 802 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 ECHS1P30084 290 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SDC2P34741 201 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 SMU1Q2TAY7 513 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-201ENST00000229330 DMAC2Q9NW81 257 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 OAZ3Q9UMX2 235 aa13.78□□□□□ -0.2
HCFC2-201ENST00000229330 H3BMM5 538 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 CBX4O00257 560 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 CASKO14936 926 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 ENDOD1O94919 500 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 NFICP08651 508 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 EPB42P16452 691 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 PSMA1P25786 263 aaKnown RBP13.77□□□□□ -0.2
HCFC2-201ENST00000229330 THPOP40225 353 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 CLK2P49760 499 aaKnown RBP13.77□□□□□ -0.2
HCFC2-201ENST00000229330 CNTN2Q02246 1040 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 IL18Q14116 193 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 TGFBIQ15582 683 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 NETO2Q8NC67 525 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 PDHXO00330 501 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 ZW10O43264 779 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 UNGP13051 313 aaPredicted RBP13.77□□□□□ -0.2
HCFC2-201ENST00000229330 DGKAP23743 735 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 AKAP5P24588 427 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 VN1R5Q7Z5H4 357 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 RNF180Q86T96 592 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 BIRC8Q96P09 236 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 CSPG4P5Q96PW8 444 aa13.77□□□□□ -0.2
HCFC2-201ENST00000229330 POLR1EQ9GZS1 481 aaKnown RBP13.77□□□□□ -0.2
HCFC2-201ENST00000229330 FAM92AA1XBS5 289 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 H3BRB1 525 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 DPYSL4O14531 572 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 BUD23O43709 281 aaKnown RBP13.77□□□□□ -0.21
HCFC2-201ENST00000229330 TYROBPO43914 113 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.21
HCFC2-201ENST00000229330 YES1P07947 543 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 USP17L7P0C7H9 530 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 ALDH9A1P49189 494 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 OVOS1Q6IE37 1185 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms